Protein Alignment EcR and nhr-77

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_493137.2
• Gene: nhr-77 / 191726
• WormBaseID: WBGene00003667
• Length: 362
• Species: Caenorhabditis elegans
• Alignment Length: 387
• Identity: 77/387 - (19%)
• Similarity: 143/387 - (36%)
• Gaps: 104/387 - (26%)

  Fly   255 PAPRVQEELCLVCGDRAS-GYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQE 318
            |...:.:.:|.||...:: ..|:..|.|..|..||||:|:.:..|.|:....|:   .||:.|:.
 Worm     2 PIVELADPICPVCEFPSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKNNQCK---GMRKNCRA 63

  Fly   319 CRLKKCLAV-GMRPECVVPENQCAMKRREKKAQKEKDKMTTSP-----SSQHGGNGSLASGGGQD 377
            ||...|:.: ||:...|                |::...|.:|     ..:..||..:..|
 Worm    64 CRFDYCVKIAGMKRNLV----------------KQRRNSTNTPMYILNRRKDSGNEEVVRG---- 108

  Fly   378 FVKKEILDLMT---------CEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDG 433
            .:|:..|...:         .:...|:....:.....|:.....|..:::..|...|   .||..
 Worm   109 MLKRMYLQFSSFSGFVTTTQSKWAHHSRKSSMSPNKEAEKDVSKILKISHGSLLKYY---IYQIT 170

  Fly   434 YEQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKA 498
            :::.:..:...|.            |.....|||.:..:|..|..|..|....:..||.:.|
 Worm   171 HDKRNNMNTLNIK------------SVEEFLEITSVQNKLAAELCKTCPGVDLLDNEDILIL--- 220

  Fly   499 CSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIED------LLHFCRQMFS---- 553
                       |:|...| :::..:..:|.|::..:.     |:|      ||.|..|:.|
 Worm   221 -----------RKYFQFS-NVWIESTWNYLRENNSVP-----IDDSELDLKLLKFINQVKSTLLV 268

  Fly   554 ----MKVDNVEYALLTAIVIF------SDRPGLEKAQ-----LVEAIQSYY-----IDTLRI 595
                :|.:.:|:|...:|.|:      :.|.....||     :::|:..||     :|:::|
 Worm   269 SFSQLKFNTIEFAAFKSICIWKLVYHETSRAMKIIAQEHYESVMKALNDYYQTYTSMDSMQI 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	24/91 (26%)
		NR_LBD_EcR	420..652	CDD:132736	41/206 (20%)
nhr-77	NP_493137.2	ZnF_C4	10..78	CDD:197701	23/70 (33%)
		HOLI	192..347	CDD:214658	33/159 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165548
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840