Protein Alignment EcR and nhr-234

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_496701.1
• Gene: nhr-234 / 189663
• WormBaseID: WBGene00012596
• Length: 357
• Species: Caenorhabditis elegans
• Alignment Length: 447
• Identity: 93/447 - (20%)
• Similarity: 157/447 - (35%)
• Gaps: 124/447 - (27%)

  Fly   252 KKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKC 316
            |:.|.|      |||||......|:.::.|..|..||||:|:....:.|::...|::...:|..|
 Worm     7 KRAPKP------CLVCGIEKGTLHFGSVVCMACASFFRRTVSFHIRFLCRYSNNCQISQDLRFIC 65

  Fly   317 QECRLKKCLAVGMRPECVVPENQCAMKRREKKAQK---EKDKMTTSPSSQHGGNGSLASGGGQDF 378
            :.||..||..||||.:.|      ..||.|.|..|   |..|                 ||..:.
 Worm    66 RSCRFDKCERVGMRRDLV------QQKRNENKLPKYVLESRK-----------------GGAGEV 107

  Fly   379 VKKEILDLMTCEP---PQHATIPLLPDE-----ILAKCQARNIPSLTYNQLAVIYKLIWYQDGYE 435
            |:..|....|.||   .:.||......|     ||         ::.::.|.|.|
 Worm   108 VRGYITSAYTAEPRRLKEPATSSAAEPEDGFSIIL---------NMKHDDLLVYY---------- 153

  Fly   436 QPSEEDLRR---------IMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQED 491
               .|::|.         |:..|     |..:..:|.|:      |..::.....|....:...|
 Worm   154 ---VEEIRNSVRARQQGGIVMSP-----QNFLETKHRTD------QFALDICTMCPGTDLLENPD 204

  Fly   492 QITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTR-------DSYKMAGMADNIEDLLHFCR 549
            ...|.|.||...:.:.::.......|.......:.||.       :.::....|
 Worm   205 FEVLYKYCSFSSLWMDLSWINASQDDWNKVLVEKDYTEIPLITYMNQFQATVTA----------- 258

  Fly   550 QMFSMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKL 614
            |:..:::|..|||.|.::.|:  :.||..:.|          ||:|.....:.|.:.:|..|.::
 Worm   259 QLARLQLDIFEYAALKSMCIW--KLGLLDSTL----------TLKIVSAEHYYGITCALSKYYRV 311

  Fly   615 LSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDVHAIPPSVQSHLQITQEENE 671
            ...|.:            |.:..:..::...:..|::|:.....:..:|||.....|
 Worm   312 TKRLEQ------------FEMATRIAEITLLIGPIFNVYRDMLVLYHNLQIEDRFKE 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	30/89 (34%)
		NR_LBD_EcR	420..652	CDD:132736	40/247 (16%)
nhr-234	NP_496701.1	ZnF_C4	12..81	CDD:197701	26/74 (35%)
		HOLI	187..337	CDD:214658	29/184 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165560
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840