Protein Alignment EcR and nhr-230

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_507681.2
• Gene: nhr-230 / 189442
• WormBaseID: WBGene00012446
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 510
• Identity: 107/510 - (20%)
• Similarity: 173/510 - (33%)
• Gaps: 169/510 - (33%)

  Fly   230 DLSPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRS-VT 293
            ||..|:|:  .|..||              .|.:|.||...|.|.|:.|:.|..|..||||: ..
 Worm     2 DLIASTSI--LSQEES--------------SELICAVCSQPARGRHFGAVACRACAAFFRRADAA 50

  Fly   294 KSAVYCCKFGRACE--------MDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQ 350
            |:.|..||.|..|:        .|      |:.|||:||..:||               .....|
 Worm    51 KTTVKPCKKGGNCQNLLNNNGWFD------CKFCRLQKCYEIGM---------------NSANFQ 94

  Fly   351 KEKD----KMTTSPSSQHGGNGSLASGGGQDFVKKEIL----DLMTCEPPQHATIPLLPDEILAK 407
            .::|    |:|..|:|.   .|.|.......||..|::    ||:.|            .::|.|
 Worm    95 FDRDPISTKLTNVPNSM---EGFLGRPHCVIFVDPEVVRCEKDLIDC------------TDLLRK 144

  Fly   408 C-----QARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHITEIT 467
            .     :....|..|.:.|              |...|.|::|....|.:.||
 Worm   145 AGRILKEGSESPLYTKSNL--------------QKLAEALQKIDICHDSSPSQ------------ 183

  Fly   468 ILTVQLIVEFAKG-------------------LPAFTKIPQEDQITLLKA--------------- 498
              .|:|:.::.|.                   ...|..:.||.::.|::|
 Worm   184 --PVKLVTKYGKEEVFSFFEQDFLKATRWFTYFDEFQDLDQEQKLELIQAIWHVWSRLYKLSTSA 246

  Fly   499 -------CSSEVMMLRMARRY---DHSSDSIFFANNRSYTRDSYKMAGMADNIED--LLHFCRQM 551
                   |..:::|:.....|   |.:.....|:....||.:  :|....||.::  |......|
 Worm   247 IGKRRQICEDKMLMISHGSEYTVMDLTKIEFDFSWCTKYTNE--QMQHFIDNTQNSFLYKLVDYM 309

  Fly   552 FSMKVDNVEYALLTAIVIF---SDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAK 613
            ..:|..:||.:.:.....|   ..|...:..::.|..|....|.|..:.:     |...:..|:.
 Worm   310 MDLKPSDVELSFMICQACFHYAGQRFHGKMLEICENFQQKLADELHEFYV-----DEWRMPNYSG 369

  Fly   614 LLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDVHAIPPSVQSHLQITQE 668
            .||   :|..:.|:..|..:..:.|..     :.||:||::|.   .||..|.::
 Worm   370 RLS---QLLRINNRIREDIWKCRKKQE-----IAEIFDVYSIQ---YSHPDIFKD 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	29/98 (30%)
		NR_LBD_EcR	420..652	CDD:132736	47/280 (17%)
nhr-230	NP_507681.2	NR_DBD_like	20..98	CDD:295381	29/98 (30%)
		Hormone_recep	181..391	CDD:278530	38/233 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165633
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840