Protein Alignment EcR and nhr-228

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001041172.1
• Gene: nhr-228 / 188977
• WormBaseID: WBGene00020852
• Length: 396
• Species: Caenorhabditis elegans
• Alignment Length: 244
• Identity: 54/244 - (22%)
• Similarity: 97/244 - (39%)
• Gaps: 51/244 - (20%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVT-KSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAV 327
            |.:|..||.|.|:..::|..|..||||:.: |.....|: |.:|:...|.   |:.|||:||..:
 Worm    13 CRICDQRAHGNHFGVISCRACAAFFRRTASGKWDNQKCR-GGSCDKKTYY---CKPCRLQKCRDM 73

  Fly   328 GMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPP 392
            ||               ...|.|..:|.:.|:...|.......|..|..:|       |:.|:..
 Worm    74 GM---------------DTTKFQFNRDNIPTAGQFQLPPQTFEAYVGRPEF-------LLFCDTD 116

  Fly   393 QHATIPLLPDEILAKCQARNI------PSLTYNQLAVIYKLIWYQDGYE--QPSEEDLRRIMSQP 449
            ...:..|:....|.:...|.:      |....|||..:      ..|::  :...::::::
 Worm   117 APNSKVLIDVRYLLEEAGRLLNNGIITPIWAENQLKKL------TQGFKHIKLDTDNIKKV---- 171

  Fly   450 DENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKA 498
               |:.....|..:.|...:||   .::......|.|:.::.|:|:|:|
 Worm   172 ---ETADQKEFMEMWEYYFITV---TKWLMYFDEFQKLNRQIQMTMLQA 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	26/87 (30%)
		NR_LBD_EcR	420..652	CDD:132736	14/81 (17%)
nhr-228	NP_001041172.1	ZnF_C4	13..76	CDD:197701	25/81 (31%)
		Hormone_recep	167..377	CDD:365875	11/58 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165638
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840