Protein Alignment EcR and nhr-227

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001256013.2
• Gene: nhr-227 / 188976
• WormBaseID: WBGene00020851
• Length: 240
• Species: Caenorhabditis elegans
• Alignment Length: 220
• Identity: 42/220 - (19%)
• Similarity: 69/220 - (31%)
• Gaps: 88/220 - (40%)

  Fly   263 LCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQE--------- 318
            :|.:|..:|.|.|:..:||..|..|||||.|..               :::|||..
 Worm     6 VCRICELQADGTHFGVVTCRACAVFFRRSTTSK---------------WIKRKCMARSEDKLIII 55

  Fly   319 --------CRLKKCLAVGM--------RPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGN 367
                    .::.||.:..:        :||..:..|.|        ..:...|..||..|
 Worm    56 VQAIWHVWSKVHKCASTALYRKSNPNAKPEQKIFRNMC--------MDRNLGKFDTSWMS----- 107

  Fly   368 GSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPD-------EILAKCQARNIPS-LTYNQLAVI 424
                     |:..:.::..|           |.|:       |.|.|....::.| ..:.||...
 Worm   108 ---------DYSTEHVIRFM-----------LTPNVYDFEIIEALGKLDPTDVESTFMFAQLCFE 152

  Fly   425 Y-------KLIWYQDGYEQPSEEDL 442
            |       .::...|.::|....||
 Worm   153 YAGKRFQGNILQITDRFQQVLSNDL 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	23/112 (21%)
		NR_LBD_EcR	420..652	CDD:132736	7/30 (23%)
nhr-227	NP_001256013.2	ZnF_C4	7..>44	CDD:197701	15/51 (29%)
		Hormone_recep	48..220	CDD:333840	25/163 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165644
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840