Protein Alignment EcR and nhr-217

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_493122.2
• Gene: nhr-217 / 188330
• WormBaseID: WBGene00011651
• Length: 383
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 77/407 - (18%)
• Similarity: 137/407 - (33%)
• Gaps: 107/407 - (26%)

  Fly   218 SDSVNSISSGRDDLSPSS--SLNGYSANESCDAKKSK---------KGPAPRVQEELCLVCGDRA 271
            |:.::.||....|.||:|  ::......|.|...|..         |.||..|.:..|.:
 Worm     6 SNMLDRISGLSKDASPNSTTTIQEIITLEKCLTSKVSALFLICKMLKIPACPVCDVPCRI----- 65

  Fly   272 SGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVP 336
             ..|:..:.|..|..||||:|:.:..|.||..:.|..   .|:.|:.||.::|:
 Worm    66 -EPHFGGIACAACAAFFRRTVSLNIGYMCKREKLCRK---ARKSCRACRFERCV----------- 115

  Fly   337 ENQCAMKRREKKAQKEKD--KMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPL 399
                      |.|..::|  :...:|.     |..|.....||....||:.....        |.
 Worm   116 ----------KSAGLQRDYVRQLLTPR-----NTPLYILNRQDNTGGEIVRAFAS--------PT 157

  Fly   400 LPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT 464
            :|       :....|.|.::.:..:             |...|.:...    |:.:..|..|...
 Worm   158 MP-------KPEPTPQLGFSDILKV-------------SNSSLFKFYL----NQVEKAVKLRQKN 198

  Fly   465 EITILT-----------VQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDS 518
            .:||.|           .:|.:|..:..|....:.:||:..:.|......:.:.....|..:.:.
 Worm   199 TLTIKTNAELLKIVATQQELALEACRTCPGMDLLDKEDRKVVQKYFVFSNVWIESTWLYSLAKEH 263

  Fly   519 IFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIF------SDRPGLE 577
            :...||.::   ...:....:.::..|.|....|.:.:  .|.|...||.|:      :.|....
 Worm   264 LETENNLNF---DINLKKFIEQVKSTLLFSFSQFKLNI--FELAAFKAICIWKLIYHETSRAMKI 323

  Fly   578 KAQ-----LVEAIQSYY 589
            .||     :..|:::||
 Worm   324 IAQEHYDGVASALRNYY 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	20/89 (22%)
		NR_LBD_EcR	420..652	CDD:132736	31/192 (16%)
nhr-217	NP_493122.2	NR_DBD_like	56..116	CDD:295381	19/89 (21%)
		HOLI	215..368	CDD:214658	23/131 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165552
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840