Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001343620.1 | Gene: | nhr-216 / 188325 | WormBaseID: | WBGene00020385 | Length: | 490 | Species: | Caenorhabditis elegans |
Alignment Length: | 473 | Identity: | 94/473 - (19%) |
---|---|---|---|
Similarity: | 160/473 - (33%) | Gaps: | 169/473 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 254 GPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFG-RACEMDMYMRRKCQ 317
Fly 318 ECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKE 382
Fly 383 ILDLMTCEPPQHATIPLLP------DEIL---AKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPS 438
Fly 439 EEDLRRIMS---------QPDENESQTDVSFRHITEITILTVQLI-----------VEFAKGLPA 483
Fly 484 FT------------------------KIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANN 524
Fly 525 RSYTR-----------------------------DSYKMAGMADNIEDLL-HFCRQMFSMKVDNV 559
Fly 560 EYA-LLTAIVIFSD----RPGLEKA--QLVEAIQS----YY-------IDTLRIYILNRHCGDSM 606
Fly 607 SLVFYAKLLSILTELRTL 624 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 30/90 (33%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 45/297 (15%) | ||
nhr-216 | NP_001343620.1 | ZnF_C4 | 60..130 | CDD:197701 | 29/69 (42%) |
Hormone_recep | 287..474 | CDD:306586 | 30/197 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165514 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |