Protein Alignment EcR and nhr-213

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_506974.1
• Gene: nhr-213 / 188172
• WormBaseID: WBGene00011520
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 443
• Identity: 96/443 - (21%)
• Similarity: 173/443 - (39%)
• Gaps: 107/443 - (24%)

  Fly   248 AKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVT--KSAVYCCKFGR-ACEMD 309
            :.:|...||..|   ||.||...|.|.|:..|.|..|..||||:|.  :...|.||.|: .|.:|
 Worm    11 SSESSTSPATIV---LCKVCALSAHGSHFGVLACRACAAFFRRTVVLERQKQYKCKKGKNECPVD 72

  Fly   310 MYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKK-----AQKEKDKMTTSPSSQHGGNGS 369
            ...|.:|:.||..||:.:||.||.|....:.|.:.|::|     ||....|:.  |.|.:...|.
 Worm    73 TAERYQCRLCRYNKCVDLGMTPENVQFNRESASRTRKRKNENSIAQTNSFKLI--PRSDNAFLGK 135

  Fly   370 LASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGY 434
                      .:.|:|:.:           |..:|.:....:     |||..:...|:     ..
 Worm   136 ----------PRTIMDISS-----------LSTKIKSVLNGK-----TYNLDSAAKKM-----NS 169

  Fly   435 EQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGL---PAFTKIPQEDQITLL 496
            .:.:|..|::..||....:....|....:.::.::..:.:|..|:.|   |.|..:.:|::....
 Worm   170 LEAAEYALKKWRSQQKTEDKMEKVGELPVRQLFVIFEKQMVMIAEWLIHNPDFRMLDEEEKYLYF 234

  Fly   497 KACSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDN-VE 560
            ||      :..|.||::....|:....|:..|:..:.::.     |.|         |.:|: ::
 Worm   235 KA------VWNMWRRFERFEMSVKMFGNQVLTKRKFAISN-----EKL---------MVMDSCID 279

  Fly   561 YALLTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTE-LRTL 624
            |:.:|      |.|..:.|::....:|                         ||...|.: |..|
 Worm   280 YSEIT------DLPNSKVAEMFRLTRS-------------------------KLFHQLAKPLMEL 313

  Fly   625 GNQNAEMCFSL-----KLKNRKLPKFLEEIWDVHAIPPSVQSHLQITQEENER 672
            ...:.||.:.|     ::..:|:...:.||.:  .:..::...|....::||:
 Worm   314 NPSSIEMAYMLTQLSWQIAGKKMQGNVIEIGE--RVCDNLADDLHSYYQKNEK 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	36/97 (37%)
		NR_LBD_EcR	420..652	CDD:132736	41/241 (17%)
nhr-213	NP_506974.1	ZnF_C4	23..95	CDD:197701	29/71 (41%)
		Hormone_recep	189..391	CDD:278530	39/229 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165511
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840