Protein Alignment EcR and nhr-201

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001379591.1
• Gene: nhr-201 / 187408
• WormBaseID: WBGene00019741
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 408
• Identity: 85/408 - (20%)
• Similarity: 133/408 - (32%)
• Gaps: 128/408 - (31%)

  Fly   262 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
            |.|.||...|.|.|:.|.||..|..||||....:.:..||....|..|......|::|||::|..
 Worm    18 EKCPVCWKPAHGMHFGAFTCRACAVFFRRFGASNNLKPCKKNNVCNFDKNGYVSCKKCRLQRCFD 82

  Fly   327 VGMR---------PECVVPENQCAMK-------------RREKKAQKEKDKMTTSPSSQH----- 364
            :||:         |.....|.|.|:|             .|.............||:..|
 Worm    83 IGMKIDNFQFERDPYKQKLEMQAALKVIRNIPQTLDTFLGRSSLIMFTAPSFDDSPTEVHIDVRF 147

  Fly   365 -----------GGNGSLASGGGQDFVKKEILDLMTCEPPQH------------ATIPLLPDEILA 406
                       |....:.:   .:.:|:..:.|......|.            .|..:..|::|.
 Worm   148 LIDTAYRQLLKGPETPIKT---PNALKRLAIGLQNLHSAQEKPTKVMEKFGKDETFAIWEDDVLK 209

  Fly   407 KCQ-------ARNIPSLTYNQLAVIYK--LIWYQDGYEQ-PSEEDLRRIMSQPD-------ENES 454
            ..:       .:.:||..  ||.::.|  |:|  .|.|: .:....||.|...|       :||.
 Worm   210 TAKWFSYFDDFQKLPSQL--QLDIVKKEWLVW--SGLEKLAALGKTRRQMMYEDFAFVLHVDNEL 270

  Fly   455 QTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQED---------------QITLLKACSSEVM 504
               |:|:.       |:::.:.:....    |:.|.|               ||..|.....|:.
 Worm   271 ---VAFKK-------TIEVDISWCSNY----KLEQLDFFDCNFKERHEQLVQQIVALNPTDEELS 321

  Fly   505 MLRMARRYDH---------------SSDSI------FFANNRSYTRDSYKMAGMADNIED----L 544
            .:.....:.|               ..|||      ::.|:.|....|.::|.:...|..    |
 Worm   322 FMLCYLSFQHYMKHCPKHNVEIVEQLQDSISNHLHEYYLNHMSRPNYSGRIAAIMKLINAIQLFL 386

  Fly   545 LHFCRQMFSMKVDNVEYA 562
            ||...:|..|||..|.:|
 Worm   387 LHDKTKMELMKVFKVCFA 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	32/110 (29%)
		NR_LBD_EcR	420..652	CDD:132736	41/193 (21%)
nhr-201	NP_001379591.1	ZnF_C4	19..88	CDD:197701	25/68 (37%)
		Hormone_recep	184..398	CDD:395054	43/231 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165481
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840