Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_505317.2 | Gene: | nhr-143 / 186626 | WormBaseID: | WBGene00019116 | Length: | 422 | Species: | Caenorhabditis elegans |
Alignment Length: | 487 | Identity: | 92/487 - (18%) |
---|---|---|---|
Similarity: | 173/487 - (35%) | Gaps: | 132/487 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 224 ISSGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFF 288
Fly 289 RRSVTKSAV-YCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPEN---QCAMKRREKKA 349
Fly 350 QKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIP 414
Fly 415 SLTYNQLAVIYKLIWYQDG---YEQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVE 476
Fly 477 FAKGLPAFTK---------IPQEDQITLLK------ACSS-EVMMLRMAR--RYDHSSDSIFFAN 523
Fly 524 NRSYTRDSYKMAGMADNIEDLLHF-----C-RQMFSMKVDN-VEYALLTAIVIFSDRPGLEKAQL 581
Fly 582 VEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLK---------- 636
Fly 637 LKNRKLPKFLEEIWDVHAIPPSVQSHLQITQE 668 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 28/93 (30%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 46/269 (17%) | ||
nhr-143 | NP_505317.2 | ZnF_C4 | 25..94 | CDD:197701 | 23/83 (28%) |
Hormone_recep | 193..398 | CDD:278530 | 39/206 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165496 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |