Protein Alignment EcR and nhr-192

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_505584.2
• Gene: nhr-192 / 186431
• WormBaseID: WBGene00010180
• Length: 352
• Species: Caenorhabditis elegans
• Alignment Length: 315
• Identity: 82/315 - (26%)
• Similarity: 124/315 - (39%)
• Gaps: 92/315 - (29%)

  Fly   262 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
            :||.:|..:|.|.||..|:|..||.||||...:..||.||:...|........|||.||.::||.
 Worm    16 KLCEICNRQAFGKHYGVLSCYACKMFFRRMSVQKLVYNCKWSNNCFETSPYPLKCQSCRFQRCLD 80

  Fly   327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTT--------SPSSQHG-------GNGSLASGGGQ 376
            .||..|  |.||....:...:|.    |::||        ..|.||.       .|.|||
 Worm    81 AGMYLE--VHENIVEFENGNQKV----DELTTLLQNLLIMDSSRQHKLKTFYSFDNPSLA----- 134

  Fly   377 DFVKKEILDLMTCEPP-------QHATIPLLPDE--ILAKCQARNIPS-LTY-------NQLAVI 424
                 |||     |.|       |.....:.|:|  .||      |.| ::|       |:|..|
 Worm   135 -----EIL-----ENPGVVTSINQGPNYEVTPEEWAFLA------IYSHISYFLNFDFVNELHDI 183

  Fly   425 YKLIWYQD---------GYEQPSEEDLRRIMSQPDENESQTDV-------SFRHITEITILTVQL 473
            .|.|.:|.         |..:...|...::|: |...|...||       |...:..|....:..
 Worm   184 DKKIIFQHTILKLTYFCGVMRTVNEKRSKMMN-PGGQEIYPDVILQLYEKSKSTLHRICCQPLDK 247

  Fly   474 IVEFAKGLPAFTKIPQEDQ--ITLLKACS------SEVMMLRMARRYDHSSDSIF 520
            ::|:        ::..|:.  :.||..|:      ||..:::::|:.:..|:::|
 Worm   248 LLEW--------EVTDEEYCLMNLLFFCNPAIPEISEDAVVKLSRQQNIYSNALF 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	34/88 (39%)
		NR_LBD_EcR	420..652	CDD:132736	24/125 (19%)
nhr-192	NP_505584.2	ZnF_C4	17..83	CDD:197701	27/65 (42%)
		HOLI	160..321	CDD:214658	30/150 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165615
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840