Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_503276.2 | Gene: | nhr-190 / 185999 | WormBaseID: | WBGene00018622 | Length: | 405 | Species: | Caenorhabditis elegans |
Alignment Length: | 480 | Identity: | 98/480 - (20%) |
---|---|---|---|
Similarity: | 170/480 - (35%) | Gaps: | 166/480 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 255 PAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRK---- 315
Fly 316 ------CQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQH----GGNGSL 370
Fly 371 ASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYE 435
Fly 436 QPS--------EEDLRRIMSQPDENESQTDV------------SFRHITEITIL-TVQLIVEFAK 479
Fly 480 GLPAFTKIPQEDQITLLKACS---------SEVMMLRMARRY----------------DHSSDSI 519
Fly 520 FFANNRSYTRDSYKMAGMA--DNIEDLLH---------------FCRQMFSMKVDNVEYALLTAI 567
Fly 568 VIFSDRPGLEKAQLVEA--IQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAE 630
Fly 631 MCFSLKLKNRKLPKFLEEIWDVHAI 655 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 28/99 (28%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 50/296 (17%) | ||
nhr-190 | NP_503276.2 | ZnF_C4 | 10..80 | CDD:197701 | 27/93 (29%) |
Hormone_recep | 178..389 | CDD:365875 | 42/247 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165565 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |