Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504064.1 | Gene: | nhr-188 / 185912 | WormBaseID: | WBGene00018544 | Length: | 353 | Species: | Caenorhabditis elegans |
Alignment Length: | 374 | Identity: | 92/374 - (24%) |
---|---|---|---|
Similarity: | 153/374 - (40%) | Gaps: | 95/374 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRAC--EMDMYMRRKCQECRLKKCLA 326
Fly 327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
Fly 392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRI-----MSQPDE 451
Fly 452 NESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMA-RRYDHS 515
Fly 516 SDSIFFANNRSYTRD---SYKMAGMADNIEDLLHFC---RQMFSMKVDNVEYALLTAIVIFSD-- 572
Fly 573 -RPGLEKA-QLVEAIQSYYIDTLRIYIL--NRHCGDSMSLVFYAKLLSI 617 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 31/88 (35%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 50/216 (23%) | ||
nhr-188 | NP_504064.1 | ZnF_C4 | 16..84 | CDD:197701 | 27/67 (40%) |
HOLI | 162..322 | CDD:214658 | 40/164 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165619 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |