Protein Alignment EcR and nhr-182

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_503620.2
• Gene: nhr-182 / 185593
• WormBaseID: WBGene00018265
• Length: 402
• Species: Caenorhabditis elegans
• Alignment Length: 425
• Identity: 88/425 - (20%)
• Similarity: 151/425 - (35%)
• Gaps: 110/425 - (25%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYC---CKFGRACEMDMYMRRKCQECRLKKCL 325
            |.:||..:.|.|:..::|..|..||||:...|....   |......|::......|::|||||||
 Worm     6 CEICGQPSHGNHFGVISCRACAAFFRRATLNSKKKLNLNCFHDNNSEINKNGFFSCKKCRLKKCL 70

  Fly   326 AVGMRPECVVPENQCAMKRREKKAQKEKDKMTT-----------SPSSQHGGNGSLASGGGQDFV 379
            ..||               ...|.|.::||:|.           :||.    |..|   |...|
 Worm    71 EKGM---------------DASKFQLDRDKITNAIVPVNTPEIITPSI----NTFL---GRPSF- 112

  Fly   380 KKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTY--NQLAVIYKLIWYQDGYEQPSEEDL 442
                  |..|.|....:    |..|      |||....|  ::...|.|     :|..||...::
 Worm   113 ------LTLCNPMDEDS----PGPI------RNIIDCNYLLDRATEILK-----NGSWQPYNPEM 156

  Fly   443 RRI--MSQPDENESQTDVSFRH------------ITEITILTVQLIVEFAKGLPAFTKIPQEDQI 493
            ..:  :|...||......|..|            |.|..:|:.   .|:......|..:|...|:
 Worm   157 TSLEKISMGFENMRILKSSKLHYLTHMGKDQTMLIWEQEMLST---AEWLTNFQEFNSLPTNVQL 218

  Fly   494 TLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAG-----MADNIE-DLLHFCRQMF 552
            .::|:      :.:...|::..:.:..|...:.:..::..|.|     ..:|:| |:..|....:
 Worm   219 EVIKS------IWQTYGRFEKLARTAEFRRKKLFKNNNVFMVGDEACLDTENVEVDVSWFSDYTY 277

  Fly   553 SMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQ--SYYIDTLRIYILNRHCG-----------D 604
                :.|.|.:    ..|.:...|:..:..||:.  :..::.:.:.:...|.|           |
 Worm   278 ----EQVSYFM----DCFHNEIFLQIVKEFEALNPTTTELNFMLLQVCLHHAGKKLQGDVATMTD 334

  Fly   605 SMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKN 639
            .:..|...:|.....|:|.|.|.:|.:...:|:.|
 Worm   335 YLEEVISNQLHHYYQEVRKLPNYSARLARMMKVNN 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	25/89 (28%)
		NR_LBD_EcR	420..652	CDD:132736	44/253 (17%)
nhr-182	NP_503620.2	ZnF_C4	6..77	CDD:197701	24/85 (28%)
		Hormone_recep	173..381	CDD:278530	36/214 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165477
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840