Protein Alignment EcR and nhr-171

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_504934.2
• Gene: nhr-171 / 183807
• WormBaseID: WBGene00016926
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 422
• Identity: 86/422 - (20%)
• Similarity: 144/422 - (34%)
• Gaps: 136/422 - (32%)

  Fly   261 EELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRAC-EMDMYMRRKCQECRLKKC 324
            |::|.||...|...:|.|::||.||.||||.:.:...|.||....| |.....|.||:.||.|:|
 Worm    52 EKVCTVCRRPAFTRYYGAVSCEACKMFFRRMIIEKLSYDCKKINNCYETSKGTRFKCRSCRFKRC 116

  Fly   325 LAVGMRPECVVPENQCAMKRREKKA--------------QKEKDKMTTSPSSQHGGNGSLASGGG 375
            |.:||:   :.|.|...::.::.|.              :|..|:..|.
 Worm   117 LQMGMK---LPPSNYTTLELKDNKIDELANLLTDLKLRDEKRCDRFMTF---------------- 162

  Fly   376 QDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEE 440
                      ..|.:|..|        :||:|           |.:.|          :||
 Worm   163 ----------YTTTDPSLH--------DILSK-----------NTIVV----------HEQ---- 184

  Fly   441 DLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMM 505
                       |:..|..     .|.:.|....|:|:........|:..:|::.|.:|.|..
 Worm   185 -----------NDHTTTT-----IEWSFLAAYNIIEYFTSFHFIDKLNNDDKMKLFQANSFR--- 230

  Fly   506 LRMARRYDHSSDSIFFANNRSY--TRDSYKMAGMADNIEDLL------------HFCRQ----MF 552
                       .:||....|.|  .||.....|..:.:.::|            ..|.|    :.
 Worm   231 -----------SNIFCGGMRGYKEKRDKMVTPGGQEILPEILVKLLNTSPQLLRRVCCQVIARLI 284

  Fly   553 SMKVDNVEYALLTAIVIFS--DRPGLEKAQLVEAIQSYYIDTLRIY--ILNRHCGDSMSLVFYAK 613
            .:::.|.|:.||..|..|:  |.........:.:.|..|.:.|..|  :..:|...|       :
 Worm   285 ELEITNEEFVLLNLIFFFNTVDSMSDSAKSTLGSWQKLYTNALFQYCQLTYKHRAPS-------R 342

  Fly   614 LLSILTELRTLGNQNAEMCFSLKLKNRKLPKF 645
            |:.:|:..:.:....:|:.:...:....||.|
 Worm   343 LVDLLSLYQIVQKNTSEIQYIGIMTQALLPDF 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	33/104 (32%)
		NR_LBD_EcR	420..652	CDD:132736	43/248 (17%)
nhr-171	NP_504934.2	ZnF_C4	55..122	CDD:197701	28/66 (42%)
		HOLI	195..355	CDD:214658	33/180 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165614
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840