Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510004.1 | Gene: | nhr-167 / 183613 | WormBaseID: | WBGene00008208 | Length: | 343 | Species: | Caenorhabditis elegans |
Alignment Length: | 372 | Identity: | 81/372 - (21%) |
---|---|---|---|
Similarity: | 146/372 - (39%) | Gaps: | 87/372 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSA-VYCCKFGRAC-EMDMYMRRKCQECRLKKCLA 326
Fly 327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
Fly 392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQT 456
Fly 457 DVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEV-MMLRMARRYDHSSDSIF 520
Fly 521 FANNRS-YTRDSYKMAGMADNIEDLLHFCR---QMFSMKVDNVEYALLTAIVIFSDRPGL----E 577
Fly 578 KAQ-LVEAIQSYYIDTLRIYIL--NRHCGDSMSLVFYAKLLSILTEL 621 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 29/88 (33%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 42/214 (20%) | ||
nhr-167 | NP_510004.1 | ZnF_C4 | 7..75 | CDD:197701 | 28/71 (39%) |
HOLI | 147..306 | CDD:214658 | 37/174 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165598 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |