Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_494682.1 | Gene: | nhr-166 / 183605 | WormBaseID: | WBGene00016772 | Length: | 363 | Species: | Caenorhabditis elegans |
Alignment Length: | 409 | Identity: | 104/409 - (25%) |
---|---|---|---|
Similarity: | 162/409 - (39%) | Gaps: | 98/409 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRAC-EMDMYMRRKCQECRLKKCLAV 327
Fly 328 GMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPP 392
Fly 393 QHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTD 457
Fly 458 VSFRHITEITI-----LTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMA-RRYDHSS 516
Fly 517 DSIFFANNRSYTRDSY-KMAGMADNIEDLLHF-CRQMFSMKVDNVEYALLTAIVIFSDRPGLEKA 579
Fly 580 QLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNA------EMCFSLKLK 638
Fly 639 NR------KLPKFLEEIWD 651 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 32/87 (37%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 61/252 (24%) | ||
nhr-166 | NP_494682.1 | NR_DBD_HNF4A | 11..86 | CDD:143518 | 32/89 (36%) |
HOLI | 165..326 | CDD:214658 | 41/182 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165522 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |