Protein Alignment EcR and nhr-164

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001309454.1
• Gene: nhr-164 / 183381
• WormBaseID: WBGene00008056
• Length: 373
• Species: Caenorhabditis elegans
• Alignment Length: 408
• Identity: 79/408 - (19%)
• Similarity: 137/408 - (33%)
• Gaps: 151/408 - (37%)

  Fly   263 LCLVCGDRAS-GYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCL- 325
            :|.|||.... .||:..:.|..|..||||:|:.:..|.|.....|:.   |.:||:.||.:.|:
 Worm    41 VCAVCGFSCQVQYHFGGVVCGACSAFFRRTVSLNIRYLCDGDNQCKS---MLKKCRACRFESCVK 102

  Fly   326 AVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCE 390
            ..||:...|         ||:|...|      |:|.                ::|..
 Worm   103 TAGMKRSLV---------RRKKPTIK------TTPL----------------YIKNR-------- 128

  Fly   391 PPQHATIPLLPDEILAKCQARN-------IPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQ 448
                            :...||       |||.|                :..|:.|.:.
 Worm   129 ----------------ETHVRNEDVLRAFIPSYT----------------HPSPANETVE----- 156

  Fly   449 PDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLL--------KACSS---- 501
             |:.:....:...|...:.....|:.....|....||....||.:.|:        :.|||
 Worm   157 -DKGKFSEKLKLSHGNILKFYINQVRYAKRKNTNIFTIKTTEDFMRLVNFQRKIADETCSSFPGV 220

  Fly   502 ------EVMMLRMARRYDHSSDSIFFANNRSY--TRDSYKMAGMADNIEDLLHFCRQMFSMKVDN 558
                  .:::||...::    .|::..:..:|  |..|..:    ||:|        |.....:.
 Worm   221 ELIDENNILILRKYLQF----SSVWIESTWTYWITNSSVSV----DNME--------MDKRLKEL 269

  Fly   559 VEYALLTAIVIFSDRPGLEKAQLVE--AIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTEL 621
            :|:...|.::..|..    |..:.|  |.:|:::               ..|||:...::    :
 Worm   270 IEHVKSTLLISLSQL----KLNIFEFAAFKSFFV---------------WKLVFHKTSVA----M 311

  Fly   622 RTLGNQNAEMCFSLKLKN 639
            :|:|.::.| |.|..||:
 Worm   312 KTIGQEHYE-CVSSALKS 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	28/89 (31%)
		NR_LBD_EcR	420..652	CDD:132736	41/242 (17%)
nhr-164	NP_001309454.1	ZnF_C4	42..109	CDD:197701	24/69 (35%)
		HOLI	212..358	CDD:214658	30/157 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165551
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840