Protein Alignment EcR and nhr-163

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_504766.1
• Gene: nhr-163 / 183182
• WormBaseID: WBGene00016368
• Length: 358
• Species: Caenorhabditis elegans
• Alignment Length: 417
• Identity: 86/417 - (20%)
• Similarity: 147/417 - (35%)
• Gaps: 120/417 - (28%)

  Fly   259 VQEELCLVCGDRASGYHYNALTCEGCKGFFRRSV--TKSAVYCCKFGRACEMDMYMRRKCQECRL 321
            ::..||||||...|..||....|..|..||||.|  ||..:.|     .|:..:.....|:.||:
 Worm     9 IRRMLCLVCGADGSEPHYGGSCCRACAAFFRRYVHSTKQEISC-----TCDQRLISSHPCRYCRM 68

  Fly   322 KKCLAVGMRPECVVPENQCAMKRREKKAQKEKDK-MTTSPSSQHGGNGSLASGGGQDFVKKEILD 385
            .||:.:||....|.|             .:||:| :.|.|.:
 Worm    69 LKCMKIGMCKTQVQP-------------PREKNKILNTFPGT----------------------- 97

  Fly   386 LMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPD 450
                      ||      :::|.....||....|....:.|  |..  ::|..:| ||
 Worm    98 ----------TI------MISKLSNSIIPKSCNNMYRAVAK--WVD--FDQRRKE-LR------- 134

  Fly   451 ENESQTDVSFRHITEITILTVQLIVEFAKGL-PAFTKIPQEDQITLLKACSSEVMMLRMARRYDH 514
             .:...|.:...||::......|:.:..:.: ...:::.:||:.:::.....:..:| |....|:
 Worm   135 -GDDYFDYNLTQITKMVNFNTNLLWKLGESIFSDVSRLSKEDKNSMISNFYIKWQLL-MEPAIDY 197

  Fly   515 SSDSIFFAN----NRSYTRDSY------KMAGMADNIEDL-----------LHFCRQMFSMKVDN 558
            |:....|.|    |..|.:.:|      :......::|.:           ..|...::.|..|.
 Worm   198 SAQYEQFKNYIGSNAYYQKCAYFYGSSMQKGNKISDVETVKVFSPFWDYYYADFAEPVYKMNYDK 262

  Fly   559 VEYALLTAIVIF-------SDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLS 616
            |||..:..:::|       ||    :...|...|:...:..|..|..|.:|.:       .:|..
 Worm   263 VEYMAIFLLLLFDGAYSDISD----DGVNLCTNIRKVILRELNSYQSNNNCSE-------VRLAD 316

  Fly   617 ILTELRTLGNQNAE------MCFSLKL 637
            |:..||.|.....:      ||.|.|:
 Worm   317 IMETLRLLDKHEEKLHYQFWMCGSHKM 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	29/91 (32%)
		NR_LBD_EcR	420..652	CDD:132736	46/253 (18%)
nhr-163	NP_504766.1	ZnF_C4	13..76	CDD:197701	25/67 (37%)
		HOLI	165..327	CDD:214658	32/173 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165538
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840