Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504767.1 | Gene: | nhr-139 / 183179 | WormBaseID: | WBGene00016365 | Length: | 346 | Species: | Caenorhabditis elegans |
Alignment Length: | 416 | Identity: | 81/416 - (19%) |
---|---|---|---|
Similarity: | 148/416 - (35%) | Gaps: | 117/416 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 CLVCGDRASGYHYNALTCEGCKGFFRRSV--TKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
Fly 327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
Fly 392 PQHATIPLLPDEILAK-CQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQ 455
Fly 456 TDVSFRHITEITILTVQLIVEFAKGL-PAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSI 519
Fly 520 --FFANNRSYTRDSY---------KMAGMADNIEDLLHF--------CRQMFSMKVDNVEYALLT 565
Fly 566 AIVIF-------SDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCG--------DSMSLVFYA--K 613
Fly 614 LL--SILTELRTLG-NQNAEMCFSLK 636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 26/88 (30%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 42/257 (16%) | ||
nhr-139 | NP_504767.1 | ZnF_C4 | 3..66 | CDD:197701 | 23/68 (34%) |
HOLI | 154..315 | CDD:214658 | 25/164 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165537 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |