Protein Alignment EcR and nhr-161

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_504765.2
• Gene: nhr-161 / 183178
• WormBaseID: WBGene00016364
• Length: 337
• Species: Caenorhabditis elegans
• Alignment Length: 380
• Identity: 77/380 - (20%)
• Similarity: 127/380 - (33%)
• Gaps: 147/380 - (38%)

  Fly   263 LCLVCGDRASGYHYNALTCEGCKGFFRRSVT--KSAVYCCKFGRACEMDMYMRRKCQECRLKKCL 325
            ||.:|...::.||:...:|..|..||||.|.  |....|     .||.|   |..|:.||:|.||
 Worm     2 LCKICDGPSTEYHFGCPSCRACAAFFRRYVNSPKQLTEC-----NCETD---RVPCRYCRMKLCL 58

  Fly   326 AVGMRPECVVPENQCAMKRREKKAQKEKD-----------KMTTSPSSQHGGNGSLASGGGQDFV 379
            ..||               ...|.|:::|           :.|:.|          .....:.|.
 Worm    59 KAGM---------------MISKVQQKRDNNPCRLSVSGLETTSIP----------LRNNDRIFT 98

  Fly   380 KKEILDLMTCEPP-QHATIPLLPDEILAKCQARNIPSLTYNQLAVI-YKLIWYQDGYEQPSEEDL 442
            ..|....:|.|.. .|.|.|           |:.:....|:.:|:| .:::|
 Worm    99 ALENYRWLTKERKIVHKTSP-----------AKKVNFYEYSSIAIIDSRIVW------------- 139

  Fly   443 RRIMSQPDENESQTDVSFRHITEITILTVQLIVE------FAKGLPAFTKIPQEDQITLLKACSS 501
                               ::.|.|.|.::::.:      |:...|.:|..  |..||.|:  .|
 Worm   140 -------------------NLLERTFLELKVLDDIDKFNLFSNFYPKWTLF--ESAITALQ--KS 181

  Fly   502 EVMMLRMARRYDHSSDSIFFANNRSYTRDSYK-----MAGMADNIEDLL------------HFCR 549
            :|          |:    |||.|....:...|     |.|:.....::|            |...
 Worm   182 DV----------HT----FFAPNGKPAQQISKFYKDCMTGLRMKDTEVLRIFEPYWNSYYSHVAY 232

  Fly   550 QMFSMKVDNVEYALLTAIVIFSDRPGLEKA--QLVE-----------AIQSYYID 591
            .:|.:|.|.:|:..|.|:::..  ||....  :.||           .::.||::
 Worm   233 PLFELKFDQMEHMALLALMLMD--PGYTNISDECVEMCHRFRKVIQMELKGYYLE 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	27/89 (30%)
		NR_LBD_EcR	420..652	CDD:132736	37/209 (18%)
nhr-161	NP_504765.2	ZnF_C4	2..65	CDD:197701	26/85 (31%)
		Hormone_recep	114..313	CDD:278530	42/235 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165476
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840