Protein Alignment EcR and nhr-30

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_505343.2
• Gene: nhr-30 / 182887
• WormBaseID: WBGene00016091
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 449
• Identity: 93/449 - (20%)
• Similarity: 167/449 - (37%)
• Gaps: 108/449 - (24%)

  Fly   255 PAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVY-CCKFGRACEMDMYMRRKCQE 318
            |...:....|.:||..|.|.|:....|..|..||||.|..:..| |.|....|.::...|..|:.
 Worm    12 PISMMHRSTCKICGLAAHGVHFGVTACRACAAFFRRFVVLNLEYECLKDEIKCNLNKIRRSSCRH 76

  Fly   319 CRLKKCLAVGMRPECV-----VPENQCAMKRREKKAQK----EKDKMTTSPSSQHGGNGSLASGG 374
            ||.:|||.:||..:.|     |..|:  |:.|:.|.|:    |.|.....|.:      ||.|..
 Worm    77 CRFQKCLRMGMTADNVQWNRDVYSNE--MRYRKLKIQEIRNDENDASIAYPCN------SLPSTS 133

  Fly   375 GQDFVK-------KEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYN---QLAVIYKLIW 429
            ....:|       |.:|..:..|..:..         :.|....:|||..:.   .|:.||:::
 Worm   134 LYPVIKTEDQLYTKSVLSEINYENLERD---------MHKMFMSDIPSTDHGYFASLSPIYQVV- 188

  Fly   430 YQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIV----EFAKGLP-------A 483
                      |.||.|.    :::...|:.|.:     .|:::.:|    |.||...       |
 Worm   189 ----------EGLRLIR----KSQQTFDIQFEN-----RLSLETLVPHWREQAKNTAIMSMHSMA 234

  Fly   484 FTKIPQEDQITLLKA------------CSSEVM--------MLRMARRYDHSSDSIFF------A 522
            |..||..::..:.|:            .|:||.        .|.::.......|::||      .
 Worm   235 FRNIPLTEKSRIFKSLWQNIYRFERIQMSTEVFGKDCVNEKKLAISCEKAIQLDALFFDIEGVAQ 299

  Fly   523 NNRSYTRDSYKMAGMADN-IEDLLHFCRQMFSMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQ 586
            |..:.|...||:  .|:. :.::.....|: .:.::.|.:.::..::...::...|...:.:..:
 Worm   300 NKLTVTLQDYKI--FAERCVREVAQPLSQL-KLSIEEVAFLIINFVLHNEEKIIGESLTVCDKFR 361

  Fly   587 SYYIDTLRIYILNRHCGDSMSLVFYA----KLLSILTELRTLGNQNAEMCFSLKLKNRK 641
            ....|.|..|....      .::.||    |::|.:..::.:...:....|:...||.|
 Worm   362 DQIADGLHEYYKKN------DIINYAPRIKKMMSTIDAMKRIHYDDLAGEFTTNAKNSK 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	32/95 (34%)
		NR_LBD_EcR	420..652	CDD:132736	45/264 (17%)
nhr-30	NP_505343.2	ZnF_C4	20..90	CDD:197701	26/69 (38%)
		Hormone_recep	199..400	CDD:333840	34/214 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165505
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840