Protein Alignment EcR and nhr-159

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_504069.2
• Gene: nhr-159 / 182732
• WormBaseID: WBGene00015902
• Length: 359
• Species: Caenorhabditis elegans
• Alignment Length: 442
• Identity: 94/442 - (21%)
• Similarity: 156/442 - (35%)
• Gaps: 110/442 - (24%)

  Fly   232 SPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSA 296
            |...||:.||   ..|.:|             ||||...|...:|..|||:.||.||||.||:..
 Worm     3 SSPPSLSEYS---FIDPRK-------------CLVCYRPAYCNNYGVLTCDACKMFFRRVVTEKL 51

  Fly   297 VYCCKFGRAC----EMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT 357
            .|.||....|    ..|..:..||:.||.::||..||.          ...|::|:..:.::|
 Worm    52 EYTCKCSNNCFEGFSEDSTIYPKCKSCRYQECLKFGMN----------YAFRKQKRLLEIRNK-- 104

  Fly   358 TSPSSQHGGNGSLASGGGQDFVKKEILD-LMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQL 421
                              :|.....|:| |...:..:..|       :..|....| |:|
 Worm   105 ------------------KDDELDAIIDGLRYLDNHRRET-------LRTKFTISN-PTL----- 138

  Fly   422 AVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTK 486
                        .|...::.|...:..|.|.....|.||        ..:...|||...:|..:|
 Worm   139 ------------QEMVEKKGLETYVKTPKEQLRPQDWSF--------FALYTTVEFLSNMPFMSK 183

  Fly   487 IPQEDQITLLKACSSEVMMLRMARR--YDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCR 549
            :...:::.||:..:|:..:...|.|  .:..::.|.......|........|.:....:.|...:
 Worm   184 LQTAEKMCLLRNSASKCSLFAGAMRSFNEKKAEMITVDGQDIYPNSILDFVGSSGGAREFLGRIK 248

  Fly   550 QMFSMKVDNV-----EYALLTAI------VIFSDRPGLEKAQLVEAIQSYYIDTLRI----YILN 599
            .|...|:..:     |:.|:::|      |.:.......::::....|.:....|..    |.||
 Worm   249 SMVVGKLAELTVLREEFLLISSIIFCNPDVFYEPENSAAQSKVASQQQEFTAALLHFCMCKYGLN 313

  Fly   600 RHCGDSMSLVFYAKLLSILTEL-RTLGN-QNAEMCFSLKLKNRKLPKFLEEI 649
               |.|.    :.:|||:...: |...: |...|.|.:|..:.|....:||:
 Worm   314 ---GPSR----FTQLLSLCPIIQRNFDDLQFLTMMFRMKRADIKFRNIVEEL 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	32/93 (34%)
		NR_LBD_EcR	420..652	CDD:132736	45/249 (18%)
nhr-159	NP_504069.2	ZnF_C4	18..89	CDD:197701	30/83 (36%)
		HOLI	164..330	CDD:214658	32/180 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165517
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840