Protein Alignment EcR and nhr-156

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001309484.1
• Gene: nhr-156 / 182727
• WormBaseID: WBGene00015897
• Length: 392
• Species: Caenorhabditis elegans
• Alignment Length: 418
• Identity: 93/418 - (22%)
• Similarity: 138/418 - (33%)
• Gaps: 154/418 - (36%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTK--SAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
            |.|||.:|:|.|:...:|..|..||||:...  |::.|..||.|   ||.:  .|:.||||:|..
 Worm    14 CKVCGGKANGNHFGIQSCRACAAFFRRAANSKWSSMKCTTFGCA---DMLV--PCKPCRLKRCQE 73

  Fly   327 VGM--------------------------RPECVVPENQCAMKRREKKA------QKEKDKMTTS 359
            .||                          |||.|:   .|.|.....|.      ..||    ||
 Worm    74 QGMSTTNFQFDRDALKRLLVPKSVEKFVGRPESVI---FCDMTESTSKTFIDIRPLIEK----TS 131

  Fly   360 PSSQHGGNGSL--------ASGGGQDFV------------KKEILD------------------- 385
            ...::|..|.:        .:.|.:::.            |.|..|
 Worm   132 NILKNGAEGPIFGRNQLQKLANGFENYTNEISVKMIKKIGKSETADCWEYYITTTAKWLNYFNGF 196

  Fly   386 -LMTCE---------------PPQHATIPLL-PDEILAKCQA----RNIPSLTYNQLAVIYKLIW 429
             |::.|               ..:||...|| ..::....|:    ||   |..|....:|...|
 Worm   197 KLLSHELQLKITLAVWHVWGRLEKHAITALLRKQKMFTDRQSIVVGRN---LLINLEVFLYDHTW 258

  Fly   430 YQDGYEQPSEEDLRRIMS-QPDENES-QTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQ 492
            ... ||....|....:.| :.||..| ..|:...|: |:|.:..||..::|         .|..|
 Worm   259 LTK-YEPEQVEFFTGVKSLELDEVISCLVDLEPTHV-ELTYMLAQLSFQYA---------GQRFQ 312

  Fly   493 ITLLKACSSEVMMLRMARRYDHSSDSI--FFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMK 555
            ..:|||......:|         ||.:  ::.|.....|.|.::|.|                ||
 Worm   313 GEILKATEKFQQIL---------SDDLHEYYTNELEKPRYSDRVAKM----------------MK 352

  Fly   556 VDNVEYALLTAIVIFSDRPGLEKAQLVE 583
            .:|:....:..|     ||..:.|:..|
 Worm   353 CNNIIQKHIREI-----RPRADLARTFE 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	35/120 (29%)
		NR_LBD_EcR	420..652	CDD:132736	37/168 (22%)
nhr-156	NP_001309484.1	NR_DBD_like	14..79	CDD:295381	28/69 (41%)
		Hormone_recep	163..367	CDD:278530	48/247 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165636
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840