Protein Alignment EcR and nhr-155

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_503239.2
• Gene: nhr-155 / 182602
• WormBaseID: WBGene00015758
• Length: 361
• Species: Caenorhabditis elegans
• Alignment Length: 391
• Identity: 90/391 - (23%)
• Similarity: 142/391 - (36%)
• Gaps: 100/391 - (25%)

  Fly   262 ELCLVC--GDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKC 324
            |.|.||  .:|.| ||:...||..|..||||:|.....:.||....|.:....|..|:.||..||
 Worm     6 EPCQVCSTSERTS-YHFGTTTCMACASFFRRTVAFGIRFLCKSNNNCSISPKARFFCRSCRFDKC 69

  Fly   325 LAVGMRPECVVPENQCAMKRREKKAQK---------EKDKMTTSPSSQHGGNGSLASGGGQDFVK 380
            :.|||.      ::|...||..|.|.|         ..:.:....:::|   .:|.|......|:
 Worm    70 VNVGMN------KSQVQQKRDLKNAPKYIMESRNLGVHEVVRGYTTTRH---AALPSSNSTSSVE 125

  Fly   381 KEILDL---MTCEP-PQHATIPL--LPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSE 439
            ...|..   .|.:| |...:|.|  .||::|.....:...|:...||.::...:
 Worm   126 STPLSSPVDSTADPSPSEFSIILNTHPDDLLQYYVKQVEMSIVQKQLCLVQNTL----------- 179

  Fly   440 EDLRRIMSQPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVM 504
                 :::..||....:||           ...|.:|.....|....:.|||...|||......:
 Worm   180 -----LVNSADELRDLSDV-----------LNDLSMESCMNCPGVDILRQEDIEVLLKTFHFANV 228

  Fly   505 ML----RMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQ--------MFSMKVD 557
            .|    ..:|..:...||.|                 .|| |.|..|..|        :|.:|::
 Worm   229 WLDAVWAFSRHCESICDSTF-----------------EDN-EPLYQFINQVKSTLGSSLFQLKLN 275

  Fly   558 NVEYALLTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYIL--NRHCGDSMSLVFYAKLLSILTE 620
            ..|:|.|.|..::.              ..|:..|:.|.|:  :::.|.|.:|..|.|..:.:::
 Worm   276 IYEFAALKAFCVWK--------------LGYHDSTIAIKIMAEDQYIGISSALRKYYKESTSMSD 326

  Fly   621 L 621
            |
 Worm   327 L 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	33/90 (37%)
		NR_LBD_EcR	420..652	CDD:132736	42/216 (19%)
nhr-155	NP_503239.2	ZnF_C4	7..77	CDD:197701	27/76 (36%)
		HOLI	197..340	CDD:214658	36/163 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165557
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840