Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506854.1 | Gene: | nhr-150 / 182297 | WormBaseID: | WBGene00007367 | Length: | 342 | Species: | Caenorhabditis elegans |
Alignment Length: | 431 | Identity: | 79/431 - (18%) |
---|---|---|---|
Similarity: | 148/431 - (34%) | Gaps: | 156/431 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 263 LCLVCGDRASGYHYNALTCEGCKGFFRR-SVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
Fly 327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
Fly 392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRR---IMSQPDENE 453
Fly 454 SQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDS 518
Fly 519 I-FFANN----RSYTRDSYK--MAGMADNI---------EDLLHFCRQMFS------------MK 555
Fly 556 VDNVEYALLTAIVIF-------SDR-----PGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSL 608
Fly 609 VFYAKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEI 649 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 23/88 (26%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 45/273 (16%) | ||
nhr-150 | NP_506854.1 | ZnF_C4 | 2..65 | CDD:197701 | 21/81 (26%) |
HOLI | 139..310 | CDD:214658 | 36/226 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165532 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |