DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment EcR and nhr-116

DIOPT Version :10

Sequence 1:	NP_724460.1	Gene:	EcR / 35540	FlyBaseID:	FBgn0000546	Length:	878	Species:	Drosophila melanogaster
Sequence 2:	NP_507273.2	Gene:	nhr-116 / 180129	WormBaseID:	WBGene00003706	Length:	448	Species:	Caenorhabditis elegans

Alignment Length:	9	Identity:	4/9 - (44%)
Similarity:	6/9 - (66%)	Gaps:	0/9 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 CQKPVPVQY 40
            |:||...|:
Worm    92 CRKPNGQQF 100

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_724460.1	NR_DBD_EcR	261..351	CDD:143535
EcR	NP_724460.1	NR_LBD_EcR	420..652	CDD:132736
nhr-116	NP_507273.2	ZnF_C4	50..119	CDD:197701	4/9 (44%)
nhr-116	NP_507273.2	HOLI	262..414	CDD:214658
Blue background indicates that the domain is not in the aligned region.

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