Protein Alignment EcR and nhr-193

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_507131.1
• Gene: nhr-193 / 180098
• WormBaseID: WBGene00010215
• Length: 384
• Species: Caenorhabditis elegans
• Alignment Length: 350
• Identity: 72/350 - (20%)
• Similarity: 121/350 - (34%)
• Gaps: 99/350 - (28%)

  Fly   264 CLVCGDR-ASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGR-ACEMDMYMRRKCQECRLKKCLA 326
            ||:||.: ..|.|:....|..|..||||...      .|:.| .|..:....|.|:.||||:|.|
 Worm     4 CLICGAKNTRGNHFGVRCCRACAVFFRRRAG------TKYLRLKCSSENCGNRFCKPCRLKRCFA 62

  Fly   327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
            .||                            |....||          .:|.:|..|:..:   |
 Worm    63 AGM----------------------------TIEHFQH----------NRDLIKSTIVPKI---P 86

  Fly   392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLI------WYQDGYEQP--SEEDLRRIMSQ 448
            ...|.:...|..::. |    :|..:|.:..|...::      .::.|.|.|  ....|:::.:.
 Worm    87 RSFANVVGRPSFVIF-C----VPQESYRKTFVDLNVLIEKAGEIFEKGPENPYIGSTQLKKLAAA 146

  Fly   449 PDENESQTDVSFRHIT--EITILTVQLIVEFAKGL---PAFTKIPQEDQITL------------- 495
            .:........||..::  |::.......:..||.|   ..|.|||::..|.|
 Worm   147 SNFTMDWNRRSFEPLSHGEMSYFWEFYFLRTAKWLTYFEEFKKIPRDLMIKLLLSFWHVFSRLDK 211

  Fly   496 ---------LKACSSEVMMLRMARRYDHSSDSIFFANNRSY-TRDSY----KMAGMADNIEDLLH 546
                     ||.||.:...:......|.....:.|....:| .:|.:    .||.:     ||..
 Worm   212 LITTARARKLKVCSQQTWAMSNGFILDFDKTKVDFWKLSNYPAKDLFYFLNSMAAL-----DLQP 271

  Fly   547 FCRQMFSMKVDNVEYALLTAIVIFS 571
            ..:::..::|.:||:..:.|.:.||
 Worm   272 QVQELQELEVSDVEFNFMLAQLTFS 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	25/88 (28%)
		NR_LBD_EcR	420..652	CDD:132736	34/191 (18%)
nhr-193	NP_507131.1	ZnF_C4	3..68	CDD:197701	26/97 (27%)
		Hormone_recep	152..358	CDD:278530	29/149 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165472
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840