Protein Alignment EcR and nhr-102

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_506967.1
• Gene: nhr-102 / 180062
• WormBaseID: WBGene00003692
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 503
• Identity: 100/503 - (19%)
• Similarity: 184/503 - (36%)
• Gaps: 147/503 - (29%)

  Fly   212 MQHTPRSDSVNSISSGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHY 276
            |..||.:...:|.:|    .||:|:                         .:|.|||..|.|.|:
 Worm     1 MSSTPSTSDTSSETS----TSPAST-------------------------AICKVCGLCAHGLHF 36

  Fly   277 NALTCEGCKGFFRRSVT--KSAVYCCKFGR-ACEMDMYMRRKCQECRLKKCLAVGMRPECVVPEN 338
            ..|.|..|..||||:|.  :...|.|:.|. .|.:....|.:|:.||..||:.:||.||.|
 Worm    37 GVLACRACAAFFRRTVVMERQKKYKCRGGEDNCAVSSTDRYQCRLCRFNKCVELGMTPENV---- 97

  Fly   339 QCAMKRREKKAQKEKDKMTTSPSSQHGGN-------GSLASGGGQDFVK-KEILDLMTCEPPQHA 395
                       |..:|.:.||...:..|.       .::|...|..|.| :.|:|:.|..    |
 Worm    98 -----------QWNRDSIPTSRKRKDDGPIVPANDLKAMAYPDGSLFGKPRTIMDISTLS----A 147

  Fly   396 TIPLLPDEILAKCQARNIPSLT--YNQLAVI-YKLIWYQDGYEQPSEEDLRRIMSQPDENESQTD 457
            .|..:.:|     ....|...|  .|.|.:. |.|..:::  .|.|||.:.::...|
 Worm   148 KIKNILNE-----DKGGIDPATKKMNTLEIADYALRKWRN--LQRSEEKMEKLDKLP-------- 197

  Fly   458 VSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSI-FF 521
              .|.:..|....:.::.|:....|.|..:..|::....||      |..|.||::....|: .|
 Worm   198 --VRQMFAIFEKQMIVVAEWLVQNPDFRLLSLEERYIYFKA------MWNMWRRFERFEMSVKMF 254

  Fly   522 ANN----------------RSYTRDSYKMAGMAD-NIEDL-------LH--FCRQMFSMKVDNVE 560
            .|:                :.:|.|..::..:.: .::::       :|  ..:.:..::..::|
 Worm   255 GNDVVEIRKFAISNDQILTKEFTIDFSEITDVPNTTVQEMFRHSMSKMHHQVAKPLLELRPSSIE 319

  Fly   561 YA-LLT-------------AIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFY 611
            .| :||             .:|...:|...|   |...:.|||:.            :.|...:.
 Worm   320 TAYMLTQMSWQVAGKKMQGKVVEIGERVCDE---LANNLHSYYLK------------EEMRSNYA 369

  Fly   612 AKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDVHAIPPSV 659
            .:|:.:::.:.::...:.|...:::|..      :.|::.|....|.:
 Worm   370 GRLVRLMSVVNSVKKIHMERSMTMELAR------IFEVFKVDFSEPDI 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	30/92 (33%)
		NR_LBD_EcR	420..652	CDD:132736	42/273 (15%)
nhr-102	NP_506967.1	ZnF_C4	23..95	CDD:197701	27/71 (38%)
		Hormone_recep	186..389	CDD:278530	35/233 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165512
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840