Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001122983.1 | Gene: | nhr-12 / 179403 | WormBaseID: | WBGene00003611 | Length: | 456 | Species: | Caenorhabditis elegans |
Alignment Length: | 449 | Identity: | 113/449 - (25%) |
---|---|---|---|
Similarity: | 181/449 - (40%) | Gaps: | 91/449 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 258 RVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLK 322
Fly 323 KCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLM 387
Fly 388 TCEPPQHATIP---------LLPDEILAKCQA---RNIPSLTYN-QLAVIYKLIWYQDGYEQPSE 439
Fly 440 EDLRRIMSQPD-ENESQTDV----SFRHITEITILTVQLIVEFAKG-LPAFTKIPQEDQITLLKA 498
Fly 499 ------CSSE--VMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMK 555
Fly 556 VDNVEYALLTAIVIFSDRPG--LEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSIL 618
Fly 619 TELRTLGNQ-----NAEMCFSLK-LKNRKLPKFLEEIWDVHAIPPSVQSHLQITQEENE 671 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 37/89 (42%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 56/253 (22%) | ||
nhr-12 | NP_001122983.1 | ZnF_C4 | 46..115 | CDD:197701 | 30/68 (44%) |
Hormone_recep | 225..431 | CDD:278530 | 55/234 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165624 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |