Protein Alignment EcR and nhr-94

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001379662.1
• Gene: nhr-94 / 179149
• WormBaseID: WBGene00003684
• Length: 338
• Species: Caenorhabditis elegans
• Alignment Length: 411
• Identity: 81/411 - (19%)
• Similarity: 143/411 - (34%)
• Gaps: 137/411 - (33%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVT--KSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
            |.:|...:|..|:..::|..|..||||.|.  |....|     .||.:   |..|:.||:|.|:.
 Worm     3 CKICEVSSSELHFGIVSCRSCAAFFRRYVNSPKQLKKC-----NCEAE---RAPCRYCRMKMCVK 59

  Fly   327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
            .||               ...|.|:::|         |.     ....|::|::...:.|...:.
 Worm    60 NGM---------------MITKVQQKRD---------HN-----LPRAGRNFIETAQIALRNNDR 95

  Fly   392 PQHATIPLLPDEILAK--------CQARNIPSLTYNQLAVI-YKLIWYQDGYEQPSEEDLRRIMS 447
            ..:|   |....||||        ..:..|....|..:|:: .:::|
 Worm    96 TLNA---LSNYRILAKEREVVHKSSSSEQINYFEYTSIAIVDSRILW------------------ 139

  Fly   448 QPDENESQTDVSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRY 512
               :...:|.:..:.:.::..|.:     |:...|.:|..              |..:..:.::.
 Worm   140 ---KKLEKTFLELQDLNDLDKLNL-----FSNFYPKWTFF--------------ESAIFAVEKKS 182

  Fly   513 D-HSSDSIFFANNRSYTRD---SYKMAGMADNIEDL--------------LHFCRQMFSMKVDNV 559
            | |:    |||.|....:.   .||...:..:::|:              :|....:|.:|.|.:
 Worm   183 DVHT----FFAPNGKPAKQISKFYKDCMIGKSMKDIDVYRIFEPYWKSYYVHVAYPLFELKFDQM 243

  Fly   560 EYALLTAIVIFSDRPGL----EKAQ---------LVEAIQSYYIDTLRIYILNRHCGDSMSLVFY 611
            |...|.|:::..  ||.    ||..         :...::.||::       |....|.|..||.
 Worm   244 ELMALLALMLLD--PGYTNISEKCSEMCHRMRKVIQRELRGYYLE-------NNKPTDRMLKVFE 299

  Fly   612 AKLLSILTELRTLGNQNAEMC 632
            |.||...|: |.| .:..:||
 Worm   300 ALLLMEKTD-RWL-QEEVQMC 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	24/88 (27%)
		NR_LBD_EcR	420..652	CDD:132736	43/245 (18%)
nhr-94	NP_001379662.1	ZnF_C4	3..62	CDD:197701	21/66 (32%)
		Hormone_recep	115..320	CDD:395054	45/259 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165475
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840