Protein Alignment EcR and nhr-42

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_504771.1
• Gene: nhr-42 / 179084
• WormBaseID: WBGene00003632
• Length: 356
• Species: Caenorhabditis elegans
• Alignment Length: 365
• Identity: 86/365 - (23%)
• Similarity: 136/365 - (37%)
• Gaps: 110/365 - (30%)

  Fly   262 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLA 326
            :.||:|||.|...|:.||:|..|..||||.|........:..|.|::|..||:.|..||..|||.
 Worm     8 QTCLICGDSADSLHFGALSCRACAAFFRRKVAGRRNIFRRCDRQCKVDTGMRKLCASCRYDKCLK 72

  Fly   327 VGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
            ||||...|       :.|..||.|..|..:..||.:..
 Worm    73 VGMRESAV-------LSRLAKKNQNYKKSIVGSPDAYE--------------------------- 103

  Fly   392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQT 456
            |..:|    .|.:|...|:      .|::|                 ||..:|:.     |.|:|
 Worm   104 PSTST----SDSVLENLQS------AYHKL-----------------EETRKRVF-----NISET 136

  Fly   457 DVS----FRHITEITILTVQLIVEFAKGLPAFTK--IPQEDQITL--------------LKACSS 501
            .||    ::.:.::....::|::|..  |..|.|  |.||.:..|              .|:.:|
 Worm   137 HVSQCCNYKRMNDVFFEDIKLVMEHL--LETFKKSDISQEQEKLLCVHFMVPFILFEGGYKSTNS 199

  Fly   502 EVMMLRMARRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNV-----EY 561
            ::..|......|.:....:::|......:|.|.|  |:.........:|.....:|:|     |:
 Worm   200 DLFYLPSGDFIDENRIEEYYSNPDDQNDNSAKSA--AEVFRPYWKLNKQTLKTHLDDVQLDLPEF 262

  Fly   562 ALLTAIVIFSDRPGL-------------EKAQLVEAIQSY 588
            ..:||::.|.|  ||             .||:::|.:..|
 Worm   263 LFITALIYFDD--GLLDQNEECIEVCKQMKAKIIEELTDY 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	35/88 (40%)
		NR_LBD_EcR	420..652	CDD:132736	41/207 (20%)
nhr-42	NP_504771.1	ZnF_C4	9..78	CDD:197701	31/68 (46%)
		HOLI	151..327	CDD:214658	32/156 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165583
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840