Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_503561.2 | Gene: | nhr-86 / 178685 | WormBaseID: | WBGene00003676 | Length: | 407 | Species: | Caenorhabditis elegans |
Alignment Length: | 474 | Identity: | 101/474 - (21%) |
---|---|---|---|
Similarity: | 171/474 - (36%) | Gaps: | 136/474 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 237 LNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCK 301
Fly 302 FGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGG 366
Fly 367 NGSLASGGGQDFVKKEILDLMTC-------EPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVI 424
Fly 425 YKLIWYQDGYEQPSEEDLRRIMSQPD-----ENESQTDVSFRHITEITILTVQLIVEF-AKGLPA 483
Fly 484 FTKIPQEDQITLLK-------------AC----SSEVMMLRMARRYDHSSDSIFFANNRSYTRDS 531
Fly 532 YKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIY 596
Fly 597 I-----LNRHCGDSM------------SLVFYAKLLSILTE--LRTLGNQNAEMCFSLKLKNRKL 642
Fly 643 PKFLEEI-----WDVHAIP 656 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 32/89 (36%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 49/278 (18%) | ||
nhr-86 | NP_503561.2 | ZnF_C4 | 23..91 | CDD:197701 | 28/67 (42%) |
NR_LBD | 187..375 | CDD:132726 | 40/215 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165573 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |