Protein Alignment EcR and nhr-15

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001379919.1
• Gene: nhr-15 / 178558
• WormBaseID: WBGene00003614
• Length: 371
• Species: Caenorhabditis elegans
• Alignment Length: 421
• Identity: 95/421 - (22%)
• Similarity: 153/421 - (36%)
• Gaps: 124/421 - (29%)

  Fly   230 DLSPSSSLNGYSANESCDAKKSKKGPAPRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTK 294
            :.||:||.:...:.......||:..     ..|.|.:||:.|..|:|..|:|..||.||||....
 Worm     4 EYSPTSSSSSSGSPVEFKPDKSQLN-----SSEKCAICGNLAFCYNYGVLSCNACKMFFRRVEVD 63

  Fly   295 SAVYCCKFGRAC-------EMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKE 352
            ...|.||:...|       .:..:.:| |:.||.::||.|||:..|
 Worm    64 RITYHCKYWDRCYDGQEFVNVKKFSKR-CRACRYQRCLQVGMKYIC------------------- 108

  Fly   353 KDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLLPDEILAKCQARNIPSLT 417
                   |..                ::.|:|:.:..|     |..|:...:|.....|
 Worm   109 -------PGK----------------LELELLNRVDDE-----TCSLIKTLLLMDSNRR------ 139

  Fly   418 YNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHIT--EITILTVQLIVEFAKG 480
             :::|..|          .|.:..|..|:....::...|..:.:.||  :.|:|.:.:.:|....
 Worm   140 -HKIANFY----------TPDDLTLVEIVKNNKKSRMVTKSATQMITVHDWTLLGLYVTIEMFLS 193

  Fly   481 LPAFTKIPQEDQITLLKACSSEVMMLRMA-RRYDHSSDSIFFANNRSYTRDSYKMAGMADNIEDL 544
            :.....|..||:|.||:..|.:.::|..| |.|....|.:                ...|.|:..
 Worm   194 MEFMGSIDNEDKIILLRNFSFKSVILNSAMRSYSSKVDRV----------------TTPDGIDVY 242

  Fly   545 LHFCRQMFS-----------------MKVDNVEYALLTAIVIFSDRP--GL-EKA-QLVEAIQSY 588
            ..|..:|||                 :||.:.|:.||. :::|.|..  .| ||| ..:...|..
 Worm   243 PDFMLRMFSPEFVIGIRSRLIARLAELKVTDEEHMLLN-VLLFCDAALHNLSEKAVTTISKYQQM 306

  Fly   589 YIDTLRIYILNRH--CGDSMSLVFYAKLLSI 617
            |...|..|.|:|:  .|.|.    :|.|||:
 Worm   307 YSSVLLQYCLHRYQQSGPSR----FADLLSL 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	29/96 (30%)
		NR_LBD_EcR	420..652	CDD:132736	52/224 (23%)
nhr-15	NP_001379919.1	ZnF_C4	32..105	CDD:197701	26/73 (36%)
		HOLI	182..340	CDD:214658	43/173 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165617
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840