Protein Alignment EcR and nhr-104

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_741384.1
• Gene: nhr-104 / 177248
• WormBaseID: WBGene00003694
• Length: 395
• Species: Caenorhabditis elegans
• Alignment Length: 490
• Identity: 97/490 - (19%)
• Similarity: 155/490 - (31%)
• Gaps: 162/490 - (33%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVG 328
            |.||....:|.|:....|.||..||||::.....|.|.....||::......|::||.:|||.||
 Worm     6 CDVCLSPGNGKHFGVDACRGCTAFFRRTIVNKRNYSCSEDDTCEIEKSEGLLCKKCRFEKCLKVG 70

  Fly   329 MRPECVVPENQCAMKRRE--KKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEP 391
            |:.|.:       .|.|:  .:...|...:..|||:..
 Worm    71 MKKESI-------QKHRDIYGRRNPENRALIISPSTSQ--------------------------- 101

  Fly   392 PQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQT 456
             ...|||:    .|.....||     |.:|..:.:::...||:.          |........||
 Worm   102 -LQVTIPI----TLLSSVKRN-----YAELENVREIVHRMDGFS----------MFLKPAPRGQT 146

  Fly   457 DVSFRHITEITILTVQLIVEFAKG-LPAFTKIPQEDQITLLK--------------ACSSEVMML 506
               ::....:.:....|:.::... .|.|.::|...:..||:              ||
 Worm   147 ---YKETYRLLLREFYLVSDWVSNCFPLFKELPNSQKDILLRNFYLTFYNLEAGFFAC------- 201

  Fly   507 RMARRYDHSSDSIFFANN---------RSYTRDSYKMAGM--ADNIEDLLHFCRQ--------MF 552
                  .|:...::|..|         .::..|.:....|  ||........|.:        |.
 Worm   202 ------QHNKIDVWFLPNGNFIDCQNLEAFYYDPHNQQPMTSADAARLFKGTCTECKRNVLEPML 260

  Fly   553 SMKVDNVEYALLTAIVIFSDRPGLEKAQLVEAIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSI 617
            ...|...|:..|.|:::|.  .|||.       ||               .|.|.|
 Worm   261 RENVTQFEFLALAALLLFD--TGLED-------QS---------------DDCMDL--------- 292

  Fly   618 LTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDVHAIPPSVQSHLQITQEENE-----RLERAE 677
            ...:|||..:.....:|    |:.|.::...:.||.::.|.||...|..|.:.|     ....||
 Worm   293 CRNVRTLIQREMIQYYS----NKHLDEYPLRMADVISLIPRVQKAAQKMQSDMEIGHLFNTYAAE 353

  Fly   678 RMRASVGGAITAGIDCDSASTSAAAAAAQHQPQPQ 712
            :....         :|....||     .:|.|.|:
 Worm   354 KSFFE---------NCMGKETS-----NEHNPSPR 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	28/88 (32%)
		NR_LBD_EcR	420..652	CDD:132736	42/265 (16%)
nhr-104	NP_741384.1	ZnF_C4	5..74	CDD:197701	25/67 (37%)
		HOLI	156..333	CDD:214658	41/226 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165579
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840