Protein Alignment EcR and nhr-87

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_001379772.1
• Gene: nhr-87 / 176972
• WormBaseID: WBGene00003677
• Length: 363
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 88/405 - (21%)
• Similarity: 142/405 - (35%)
• Gaps: 142/405 - (35%)

  Fly   264 CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFG---RACEMDMYMRRKCQECRLKKCL 325
            |.||...::|:|:....|..|..||||:|.|:..:.| :|   .:||:.......|:.|||.|||
 Worm     5 CPVCQAPSNGFHFGVEVCSACSSFFRRAVFKNRKFRC-YGEPVNSCEVISTGNALCKGCRLAKCL 68

  Fly   326 AVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCE 390
            ||||:.|.|       .:.||...::|...::...||.:              ::.|.
 Worm    69 AVGMKKETV-------QQGRESYGKRELALVSLQRSSLN--------------IRLEF------- 105

  Fly   391 PPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQ 455
                 .:|....|     ..:|    .|..|..:..::...:|          .|.:........
 Worm   106 -----PVPYFMME-----SVKN----QYTHLESVRLVVHLNEG----------AIATPKRHTYKD 146

  Fly   456 TD-VSFRHITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLK--------------ACS---SE 502
            || :.||   |..::|..:|..|    |.....|.:.:..|||              ||.   ::
 Worm   147 TDKLMFR---EYDVVTRWVINSF----PQLADFPSDQRTILLKHFYLQFFILESGFIACKKGRND 204

  Fly   503 VMMLRMARRYDHSSDSIFFANNRSYTRD----------------SYKMAGMADNIEDLLHFCRQ- 550
            |..|       .|.|.|...|..|:.||                :..|.|....       ||:
 Worm   205 VWFL-------PSGDYIDCKNLASFYRDPTLTKVTTQPTPPENAAKVMKGTCTG-------CRRK 255

  Fly   551 ----MFSMKVDNVEYALLTAIVIFSDRPGLE-------------KAQLVEAIQSYY----IDTLR 594
                |....:|..|:..|:|:::|  :.|||             ::.:...:..||    .||:|
 Worm   256 VWNTMLKDNIDQFEFFALSALILF--QTGLEGQSESCMETCKKIRSTVQRELLQYYAAKNTDTIR 318

  Fly   595 IYILNRHCGDSMSLV 609
            :       |:.:||:
 Worm   319 M-------GNVLSLL 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	32/89 (36%)
		NR_LBD_EcR	420..652	CDD:132736	48/246 (20%)
nhr-87	NP_001379772.1	ZnF_C4	4..75	CDD:197701	28/70 (40%)
		HOLI	151..319	CDD:214658	39/190 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165578
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840