Protein Alignment EcR and nhr-16

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: NP_494785.1
• Gene: nhr-16 / 173781
• WormBaseID: WBGene00003615
• Length: 388
• Species: Caenorhabditis elegans
• Alignment Length: 396
• Identity: 74/396 - (18%)
• Similarity: 142/396 - (35%)
• Gaps: 119/396 - (30%)

  Fly   257 PRVQEEL---CLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQE 318
            ||.::::   |.:|.:.|.|:|:.|..|..|..||||:|:....|.|:....|::.:.:|..|:.
 Worm     4 PRFKDKVFLKCAICQESAEGFHFGAEACRACAAFFRRTVSNRKTYSCQGNNDCDVTINIRCMCRA 68

  Fly   319 CRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASGGGQDFVKKEI 383
            ||..||:.|||.|..|           :::....|..:..|
 Worm    69 CRYIKCIEVGMNPAGV-----------QQRLPPSKTLVEVS------------------------ 98

  Fly   384 LDLMTCEPPQHATIPLLPDEILAKCQARNIPSLTYNQLAVIYKL-------------IWYQDG-- 433
            :||.|...|...:.|..|..::.     :|||...||:.::.|:             :..:||
 Worm    99 MDLPTVSNPSILSFPSPPSSLML-----HIPSSYSNQMPILDKMRKSYETLCNARKTLHRKDGAN 158

  Fly   434 -----------YEQPSEEDLRRIMSQPD------ENESQTDVSFRHITEITILTVQLIVE----- 476
                       |::..::.::.:....|      |:.....:..:.|......|...::|
 Worm   159 IFQDNVPKPVTYKKAIDQGMKDVKLTSDWVSWCFEDFKNLSIDQKKILFHNAYTPYFMMEGGFLS 223

  Fly   477 FAKGLPAFTKIPQEDQITLLKA-----CSS---EVMMLRMARRYDHSSDSIFFANNRSYTRDSYK 533
            ..:..|....:|..|.|..|..     ||.   ::....:.|.:..|:|...    :|.|
 Worm   224 HIRNTPEHLVMPSGDYIDTLDLNSFYNCSESDRQISSKEIDRLFKPSNDRFI----KSVT----- 279

  Fly   534 MAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFSDRPGL-----EKAQLVEAIQSYYIDTL 593
                           ..|.|:::|..|:.:|..::::.  .||     |..::...:::..:..|
 Worm   280 ---------------LPMMSLQLDIFEFFVLFTLLLWD--TGLIEISEECIEIGTKVKTQVLKEL 327

  Fly   594 RIYILN 599
            ..|:.|
 Worm   328 DFYMRN 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535	27/92 (29%)
		NR_LBD_EcR	420..652	CDD:132736	33/230 (14%)
nhr-16	NP_494785.1	ZnF_C4	13..81	CDD:197701	25/67 (37%)
		NR_LBD	177..356	CDD:299703	28/183 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165571
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840