Protein Alignment EcR and rorc

DIOPT Version :9

• Sequence 1: NP_001163061.1
• Gene: EcR / 35540
• FlyBaseID: FBgn0000546
• Length: 878
• Species: Drosophila melanogaster
• Sequence 2: XP_031747715.1
• Gene: rorc / 100489391
• XenbaseID: XB-GENE-481075
• Length: 422
• Species: Xenopus tropicalis
• Alignment Length: 125
• Identity: 37/125 - (29%)
• Similarity: 70/125 - (56%)
• Gaps: 6/125 - (4%)

  Fly   462 HITEITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRS 526
            |||:    .:|.||||||.|..|.::...|||.||||.:.|::::||:|.::..:.:|:| ..:.
 Frog   232 HITD----AIQYIVEFAKRLSGFMELNPNDQIVLLKAGAMELLLIRMSRAFNCYNSTIYF-EGKY 291

  Fly   527 YTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFS-DRPGLEKAQLVEAI 585
            ...|.::..|..|.|..:...|..:.::.:...|.|..:::|:.. .:|.|::.:.||::
 Frog   292 APLDLFQSLGCNDLISAMFDLCHSLCALNLSEHEMAFFSSMVLLDPSQPWLQEKEKVESL 351

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
EcR	NP_001163061.1	NR_DBD_EcR	261..351	CDD:143535
		NR_LBD_EcR	420..652	CDD:132736	37/125 (30%)
rorc	XP_031747715.1	NR_LBD_ROR_like	177..415	CDD:132737	37/125 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910