Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936891.3 | Gene: | nr1h4 / 100489310 | XenbaseID: | XB-GENE-487942 | Length: | 478 | Species: | Xenopus tropicalis |
Alignment Length: | 453 | Identity: | 164/453 - (36%) |
---|---|---|---|
Similarity: | 225/453 - (49%) | Gaps: | 87/453 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 225 SSGRDDLSPSSSLNGYSANE---SCDAKKSKKGPAPRV----QEELCLVCGDRASGYHYNALTCE 282
Fly 283 GCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREK 347
Fly 348 --KAQKEKD----------KMTTSPSSQHGGNGSLASGGGQDFVKKEILDLMTCEPPQHATIPLL 400
Fly 401 PDEILAKCQARNIPSLTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQPDENESQTDVSFRHITE 465
Fly 466 ITILTVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSIFFANNRSYTRD 530
Fly 531 SYKMAGMA-DNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFS-DRPGLEKAQLVEAIQSYYIDTL 593
Fly 594 RIYILNRHC----GDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKLKNRKLPKFLEEIWDV 652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 65/91 (71%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 71/237 (30%) | ||
nr1h4 | XP_002936891.3 | NR_DBD_FXR | 129..212 | CDD:143520 | 61/82 (74%) |
NR_LBD | 252..473 | CDD:416257 | 72/272 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 132 | 1.000 | Domainoid score | I5066 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1137281at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24082 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |