Sequence 1: | NP_001163061.1 | Gene: | EcR / 35540 | FlyBaseID: | FBgn0000546 | Length: | 878 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093675.1 | Gene: | nr1d1 / 100101679 | XenbaseID: | XB-GENE-478094 | Length: | 522 | Species: | Xenopus tropicalis |
Alignment Length: | 574 | Identity: | 152/574 - (26%) |
---|---|---|---|
Similarity: | 231/574 - (40%) | Gaps: | 140/574 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 141 NGHGLIN--STTPSTP--TTPLHLQQNLGGAGGGGIGGMGILHHANGTP----NGLIGVVGGGGG 197
Fly 198 -------VGLGVGGGGVGGLGMQHTPRSDSVNSISSGRDDLSPSSSLNGYSANESCDAKKSKKGP 255
Fly 256 APRVQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVY--CCKFGRACEMDMYMRRKCQE 318
Fly 319 CRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMTTSPSSQHGGNGSLASG---------- 373
Fly 374 ----GGQDFVKKEILDLMTCEP--------------PQHATIPLLP-----DEILAKCQARNIPS 415
Fly 416 LTYNQLAVIYKLIWYQDGYEQPSEEDLRRIMSQP----DENESQTDVSFRHITEITIL------- 469
Fly 470 ---------------TVQLIVEFAKGLPAFTKIPQEDQITLLKACSSEVMMLRMARRYDHSSDSI 519
Fly 520 FFANNRSYTRDSYKMAGMADNIEDLLHFCRQMFSMKVDNVEYALLTAIVIFS-DRPGLEKAQLVE 583
Fly 584 AIQSYYIDTLRIYILNRHCGDSMSLVFYAKLLSILTELRTLGNQNAEMCFSLKL 637 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
EcR | NP_001163061.1 | NR_DBD_EcR | 261..351 | CDD:143535 | 39/91 (43%) |
NR_LBD_EcR | 420..652 | CDD:132736 | 68/245 (28%) | ||
nr1d1 | NP_001093675.1 | NR_DBD_REV_ERB | 110..198 | CDD:143540 | 42/117 (36%) |
NR_LBD | 331..519 | CDD:299703 | 59/190 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |