DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ars2 and srrt

DIOPT Version :10

Sequence 1:NP_610203.2 Gene:Ars2 / 35539 FlyBaseID:FBgn0033062 Length:943 Species:Drosophila melanogaster
Sequence 2:XP_031753813.1 Gene:srrt / 549806 XenbaseID:XB-GENE-5825634 Length:875 Species:Xenopus tropicalis


Alignment Length:1021 Identity:403/1021 - (39%)
Similarity:542/1021 - (53%) Gaps:225/1021 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDSDDEYDRKRRDKFRGERESY-RTERRDDRRPVGGSAGARDEWAERNPFRGGASAGGGGARHR 64
            |.||||||||:||||||.||..| |:..|::||        ||:|::|...||..      .|.|
 Frog     1 MADSDDEYDRRRRDKFRRERSDYDRSREREERR--------RDDWSDREWDRGRE------RRSR 51

  Fly    65 PDYSDYRGPGARPRYGSPVRDL-PPAKRMRPDWGDGDVRANPRFGGYD-PYLM----------QA 117
            .:|.||.....|.|:.....|| ||.||||.||.|..  ::|...||| ||..          |.
 Frog    52 GEYRDYESRSRRERFSPQRHDLSPPQKRMRRDWDDHG--SDPYHSGYDMPYSSAAGGPGYGPPQP 114

  Fly   118 WNDHYQSMHSAYSHGGHAPPVRESIGGGGGDTLTQPA--MLNLKQFLDTQDENISDSEVMRKYTE 180
            |.  :..:|....||   .|::..:|......|..||  |...|:||.:.::::.::|.:::|.:
 Frog   115 WG--HPEIHVMQHHG---IPIQARLGNLHEVDLGTPAPIMKTFKEFLLSLEDSVDETEAVKRYND 174

  Fly   181 YKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRSEEQRGFLQRRTDVFMELLENGTIGSVKVD 245
            ||.||:|||:.|||:||||||||::||||::..|..:|.:..|:.|...||.|:||..:..|::|
 Frog   175 YKIDFRRQQMQEFFLAHKDEEWFRSKYHPDEVGKHKQESQAALRNRLSAFMYLMENSWLNEVQLD 239

  Fly   246 SSQADALIRVLDTCVIKLEGGTDEDLKVLDEKPKDPVVYERKAEQMQSVKEVEKTINSPKEEMSE 310
            .:|:.|:|:|||..|||:||||:.|||:|||:.::......|.|:.::. |.||.:...||..::
 Frog   240 IAQSTAIIKVLDAAVIKMEGGTEIDLKILDEEEEEAKREAAKKEEARAT-EAEKKVTEEKEPPAK 303

  Fly   311 AD---PVSTQRKPVRPVNSDGENWDDDDAENSAPKKELAEDSKDSDSKPEDKQLNKKKTKKRKRN 372
            .:   ...|:.|||:|        ::::.|....|:|           || ::..|..|:||||:
 Frog   304 PEKDKEAETEEKPVKP--------EEEEEEKKVEKEE-----------PE-RETRKPGTRKRKRS 348

  Fly   373 SSDDDSSSSESSSSSDEEKLKEKYDVEDGLRAEQKTEAEKDRQEATKAKQGPQSPKLDEDEGNEN 437
            ...||.|.|||.:.:                                     .|||         
 Frog   349 GDSDDGSDSESDTET-------------------------------------ASPK--------- 367

  Fly   438 TEPKGLDSKINTYEEIDNTLKSPEISSNPIKNTDNGDGSKVEEDGEKPSVGKDKVVETETIDLDK 502
              ||                     :..|.:|....|..|.||:.||.   |:|..|      |.
 Frog   368 --PK---------------------AETPSQNGRAEDTPKKEEETEKQ---KEKQKE------DP 400

  Fly   503 VKDGQPRALHRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVAIADPLVERRWYRRGWITFMRDV 567
            ||   ||.||:|.|||:||:.|:|:::||.|:|.|:.|::|||:::|..|||:.|:.::||.|.|
 Frog   401 VK---PRPLHKTCSIFMRNIPPNISKAEITALCKRYPGFMRVALSEPQPERRFLRKAYVTFDRSV 462

  Fly   568 NIKEICWGLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIALNLDEKFRLW 632
            |||||||.:.|.|||:||:...|||||:.|||..||||.|:.:||:||||.|::...|||:..||
 Frog   463 NIKEICWSVQNIRLRECELSPGVNRDLTYRVRNINGITMHRPIVRNDIKLAARLIHALDERALLW 527

  Fly   633 AEGPKDDSNSARANESSENGSGSTYGFNSQNPVLQNITDYLIEEASAEEEELLGLTGENKDT--- 694
             ||.:.|..                 .::|||:|:|||||||:|.:|||||||...|...:|   
 Frog   528 -EGEQGDQM-----------------VSAQNPILKNITDYLIDEVNAEEEELLFSAGRTPETETP 574

  Fly   695 -EGEP----IERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGP-PPVRV 753
             ||.|    :||||:||.|||:|:.||||||||||||.||||.|||||.|||::|.||| ||.||
 Frog   575 KEGNPTEISVERDEKLIKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRV 639

  Fly   754 TNNDVQEYIKIYESKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG 818
            ::.:|.|:.|.:|.||.........||:||...:|.||.|.||||||.||||||.|:||||||||
 Frog   640 SHGEVAEWQKTFEEKLSPLFAVRETLSEEEAVKMGKKDPEQEVEKFVTANTQELGKEKWLCPLSG 704

  Fly   819 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQYFNNYLRDPKRPQLPE----HPGTSKRPESESARGG 879
            ||||||||:||||||||.||::||:|||.:|||||.|.|||.|||    .|     |...:.:..
 Frog   705 KKFKGPEFVRKHIFNKHGEKIEEVKKEVAFFNNYLIDSKRPALPEVKPLQP-----PVGTAGQAL 764

  Fly   880 GGGYRPPMYPPFSAMPYG--------------FGPPMMGGGRG------GRNFPPA--RRELPL- 921
            ..|...|...|.:.:||.              |.|...|.|||      |:...|.  |..|.| 
 Frog   765 AAGLLYPHQGPQALLPYAQPRPPVLGYAGAPQFPPTPYGAGRGNYDAFRGQGMYPGKPRNRLALS 829

  Fly   922 -------------EHQ------------RRLIGYHDLDAPANSDMF 942
                         .|.            |.:|.|.|||||.:.:.|
 Frog   830 LPSSILPTCLSVPSHSSSPPRRMIRGDPRAIIEYRDLDAPDDVEFF 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ars2NP_610203.2 SERRATE_Ars2_N 159..268 CDD:463453 50/108 (46%)
ARS2 746..896 CDD:461498 82/154 (53%)
srrtXP_031753813.1 SERRATE_Ars2_N 153..262 CDD:463453 50/108 (46%)
RRM 411..>459 CDD:214636 22/47 (47%)
ARS2 631..824 CDD:461498 92/197 (47%)

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