DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-5 and ATXR2

DIOPT Version :10

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:347 Identity:75/347 - (21%)
Similarity:114/347 - (32%) Gaps:101/347 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CKMVRYCDREHQKQHW-PQHKRRC---RPFSEEQDAELGRYLKVTQN------IAAGQIVFIEEP 75
            |:...||........| ..|...|   |..|..::| ||.::|...:      :||..|.|   .
plant   180 CQEAFYCSESCAAADWESSHSLLCTGERSESISREA-LGEFIKHANDTNDIFLLAAKAIAF---T 240

  Fly    76 LVVGPKWYLSDADKEA-SNVPCVGCYTPCRLGKHQCRRCRWPVCSAGCKHESMECSVLSLGSGSP 139
            ::...|......||:| .:.|           |.......|...|.|.|....:|..|. ....|
plant   241 ILRYRKLKAEHVDKKAKQSEP-----------KQSLLLEAWKPVSIGYKRRWWDCIALP-DDVDP 293

  Fly   140 TRADARSLNDYFRGD-------ALLVLKCLLLQRQSPTKWSALLEMQSHEE-----ERKGTDL-- 190
            |...|      ||..       :|.:||..:..::.    .||..::.:..     |....||  
plant   294 TDEGA------FRMQIKNLACTSLELLKIAIFDKEC----EALFSLEIYGNIIGMFELNNLDLVV 348

  Fly   191 -------------YEEAEKRVVTYLQKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIEL 242
                         ..:|||.....:.:.||..|...    .:||        |            
plant   349 ASPVEDYFLYIDDLPDAEKEETEEITRPFLDALGDE----YSDC--------C------------ 389

  Fly   243 PSGVELSGLFRQACMMEHACQPNC-----DFQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGT 302
             .|.....|  |:| |.|:|.||.     :...|.:...:|:|.   :.|.:.:.|:|.:.....
plant   390 -QGTAFFPL--QSC-MNHSCCPNAKAFKREEDRDGQAVIIALRR---ISKNEEVTISYIDEELPY 447

  Fly   303 QLRQHHLRLTKHFSCRCSRCLD 324
            :.|| .|.....|||:||:||:
plant   448 KERQ-ALLADYGFSCKCSKCLE 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312 5/22 (23%)
SET_SMYD <232..322 CDD:380997 23/94 (24%)
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 5/22 (23%)
SET_SMYD <380..466 CDD:380997 27/117 (23%)

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