DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-5 and Smyd3

DIOPT Version :10

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_081464.1 Gene:Smyd3 / 69726 MGIID:1916976 Length:428 Species:Mus musculus


Alignment Length:460 Identity:94/460 - (20%)
Similarity:157/460 - (34%) Gaps:156/460 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AELGRYLKVTQNIAAGQIVFIEEPLVVGPKWYLSDADKEASNVPCVGCYTPCRLGKH---QCRRC 113
            |..|..|:....:..|:::|..:||..       ...|.:..|.|    ..|.|||.   :|.:|
Mouse    12 ANRGNGLRAVAPLRPGELLFRSDPLAY-------TVCKGSRGVVC----DRCLLGKEKLMRCSQC 65

  Fly   114 R-WPVCSAGCKHES-----MECSVLSLGSGSPTRADARSLNDYFRGDALLVLKCLL--LQRQSPT 170
            | ...|||.|:.::     .|||.|            :|....:..|::.:|..::  |..:.|:
Mouse    66 RIAKYCSAKCQKKAWPDHRRECSCL------------KSCKPRYPPDSVRLLGRVIVKLMDEKPS 118

  Fly   171 ---KWSALLEMQSH-----EEERKGT-------------------------DLYEEAEKRVVTYL 202
               |..:..:::|:     |::::|.                         ||:|...|      
Mouse   119 ESEKLYSFYDLESNISKLTEDKKEGLRQLAMTFQHFMREEIQDASQLPPSFDLFEAFAK------ 177

  Fly   203 QKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIELPSGVELSGLFRQACMMEHACQPNCD 267
               .:|       |..|.|..||..                .||   ||:....::.|:|.|||.
Mouse   178 ---VIC-------NSFTICNAEMQE----------------VGV---GLYPSMSLLNHSCDPNCS 213

  Fly   268 FQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCSRCLDPTEYGTYI 332
            ..|:.  ..:.:||..::..|:.|.|.|.::|..::.|:..||....|.|.|.||....:     
Mouse   214 IVFNG--PHLLLRAVREIEAGEELTICYLDMLMTSEERRKQLRDQYCFECDCIRCQTQDK----- 271

  Fly   333 SALTCLGDVNQTCGGTHLPVDPLDENTQWKCDTCPMIVDGAYVAELQSHMT-EQVEGLLAGCPSA 396
                   |.:...|         ||.. ||    .:......:.||::|.. |||..|.....::
Mouse   272 -------DADMLTG---------DEQI-WK----EVQESLKKIEELKAHWKWEQVLALCQAIINS 315

  Fly   397 NQVELLLARLTHMLHPNHFHTFNLKHTLIQLYGNEAGLELGVLSNTQLERKLRLCGELYNVCRRL 461
            |.              |.....|:....:.....:|.:.||:|...           |:...|.:
Mouse   316 NS--------------NRLPDINIYQLKVLDCAMDACINLGMLEEA-----------LFYAMRTM 355

  Fly   462 DPYSI 466
            :||.|
Mouse   356 EPYRI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312
SET_SMYD <232..322 CDD:380997 23/89 (26%)
Smyd3NP_081464.1 SET_SMYD3 5..268 CDD:380980 69/315 (22%)
zf-MYND 49..87 CDD:460312 12/41 (29%)
C-terminal domain, essential for histone methyltransferase activity, nuclear localization and mediates interaction with HSP90AA1. /evidence=ECO:0000250|UniProtKB:Q9H7B4 272..428 25/128 (20%)
Blue background indicates that the domain is not in the aligned region.

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