DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-5 and Smyd5

DIOPT Version :10

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster


Alignment Length:374 Identity:79/374 - (21%)
Similarity:133/374 - (35%) Gaps:115/374 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GRYLKVTQNIAAGQIVFIEEPLVVGP-KWYLSDADKEASNVPCVGCYTPCR-------------- 104
            ||.:..|:|.|..:::|.|||.|... .|.::     .....|..|..|..              
  Fly    13 GRAMIATKNFAKDEVIFEEEPFVSRQFSWNVA-----YGYAACDHCMRPLETVLENVRRLASDPK 72

  Fly   105 ----LGKH-----------QCRRCRWPVCSAGCKHESME--CSVLSLGS-GSPTRADARSLNDYF 151
                |.:|           ||.||:...||..|..|:.:  ..|..:|: .|........||:.:
  Fly    73 VEVPLLQHDPTAQWVAQFTQCPRCKVRYCSEDCLMEAQKRYHRVACMGAFHSDDTHPINVLNETW 137

  Fly   152 R--------GDALLVLKCLLLQRQSPTKWSALLEMQSHEEERKGTDLYEEAEKRVV-TYLQKRFL 207
            :        |..:|:::.:.|.:||..|...|.::||.:      .|....|:::. ..|.:.|.
  Fly   138 KKMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQ------SLIVNREQKIYHKMLGENFE 196

  Fly   208 CRLKQTNPNLLTDCG------------PEMLHRLCGIIETNFM-------------VIELP---- 243
            .:::|.   .|..|.            |:....|..|:.||..             |.:||    
  Fly   197 QQMEQL---YLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDS 258

  Fly   244 ---------SGV--------------ELSGLFRQACMMEHACQPNCDFQFDNKTQQVAVRAGCDL 285
                     .|:              |.|||:.....:.|:|.||....|......|.::|...:
  Fly   259 EKEQLDTVIDGLYAKVGEFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAPI 323

  Fly   286 RKGDHLRITYTN--ILWGTQLRQHH-LRLTKHFSCRCSRC----LDPTE 327
            ::|:.:.|:|.:  :|..::..:|. ||....|.|:|.:|    .||.|
  Fly   324 QQGEEICISYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQASDPDE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312
SET_SMYD <232..322 CDD:380997 28/132 (21%)
Smyd5NP_650955.1 SET_SMYD5 3..366 CDD:380919 76/366 (21%)
zf-MYND 87..118 CDD:460312 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.