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Protein Alignment SmydA-5 and pdcd2
DIOPT Version :10
| Sequence 1: | NP_610202.3 |
Gene: | SmydA-5 / 35538 |
FlyBaseID: | FBgn0033061 |
Length: | 553 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001038603.2 |
Gene: | pdcd2 / 393370 |
ZFINID: | ZDB-GENE-040426-1236 |
Length: | 358 |
Species: | Danio rerio |
| Alignment Length: | 88 |
Identity: | 28/88 - (31%) |
| Similarity: | 42/88 - (47%) |
Gaps: | 11/88 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 7 CPVCGVAASQACTRCKMVRYCDREHQKQHWPQ-HKRRCRPFSEEQDAELGRYLKVTQNIAAGQIV 70
|.:||....:||:||..|.||.:|||...|.| ||:.|...:.:...||..:|.....:
Zfish 145 CRLCGCLGQKACSRCHSVTYCCKEHQTTDWKQRHKKECLAEASQVSGELNSFLFPEWEL------ 203
Fly 71 FIEEPLVVGPKWYLSDA---DKE 90
:.||.|:..|..|.:: |:|
Zfish 204 -VTEPEVIPAKDELQESPSLDQE 225
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmydA-5 | NP_610202.3 |
zf-MYND |
7..43 |
CDD:460312 |
17/36 (47%) |
| SET_SMYD |
<232..322 |
CDD:380997 |
|
| pdcd2 | NP_001038603.2 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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