DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-5 and LOC3289638

DIOPT Version :10

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_566179.1 Gene:LOC3289638 / 3289638 VectorBaseID:AGAMI1_014221 Length:526 Species:Anopheles gambiae


Alignment Length:371 Identity:78/371 - (21%)
Similarity:131/371 - (35%) Gaps:80/371 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SQACTRCKMVRYCD------REH----QKQHWPQHK---RRCRPFSEEQDAELGRYLKVTQNIAA 66
            |:.|.|..::...|      ..|    .|..:|.::   |........:..:.||||:..:.:..
Mosquito   105 SERCARSMLLSATDDATPGSSRHGAAPLKLSFPAYENAPRVANCLEMRRSPQYGRYLQTNKALKV 169

  Fly    67 GQIVFIEEPLVVGPKWYLSDADKEASNVPCVGCYTPCRLGKHQCRRC-RWPVCSAGC------KH 124
            |.:|.|:||       |:|..:.|.....|..|..|.......|.|| :...||..|      ::
Mosquito   170 GDVVMIDEP-------YVSVLEPEFCYARCDHCQRPAPFTLIPCERCTKAMYCSKNCLRRARTEY 227

  Fly   125 ESMECSV---LSLGSGSPT-----RADARSLNDYFRGDALLVLKCLLLQRQ--SPTKWSALLEMQ 179
            ...||::   |:..:..|.     ||..|:::.|...     |:.|..:|.  |.|:.:.|:...
Mosquito   228 HEFECALVHHLTETTRDPVVLLAWRAVTRAISTYRYN-----LRHLKQRRNYLSRTEVNPLMLNW 287

  Fly   180 SHEEERKGTDLY----------EEAEKRVVTYLQKRFLCRLKQTNPNLLTDCG--------PEML 226
            ...::...:.:|          :..|.| |..:.:...|.|...|.....|..        .||.
Mosquito   288 VDGQKIAFSAVYILASLARAPNDPVEAR-VAQISREMHCHLVSENGQTANDDSGSVPYPWVGEMC 351

  Fly   227 HRLCGIIETNFMVIELPSGVELSGLFRQA-----C-----MMEHACQPN--CDFQFDNKTQQVAV 279
            :|...:::.|....:|....|..|.:|..     |     ::.|:|.||  |....|.:...|.:
Mosquito   352 YRFLKVMQCNARPAQLTRRDEPEGQYRAVPFALRCHPLISLLNHSCAPNVKCFDLRDGRCSAVVI 416

  Fly   280 R---AGCDLRKGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCSRC 322
            :   ||..|    .....|..:..|...|:..|:....|:|.|..|
Mosquito   417 QPIAAGGQL----FANYGYDYLQTGRDERREGLQRVFGFTCNCDAC 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312 8/40 (20%)
SET_SMYD <232..322 CDD:380997 23/104 (22%)
LOC3289638XP_566179.1 SET 143..458 CDD:394802 70/331 (21%)

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