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Protein Alignment SmydA-5 and Smyd4

DIOPT Version :9

Sequence 1:	NP_610202.3	Gene:	SmydA-5 / 35538	FlyBaseID:	FBgn0033061	Length:	553	Species:	Drosophila melanogaster
Sequence 2:	NP_001096081.1	Gene:	Smyd4 / 319822	MGIID:	2442796	Length:	799	Species:	Mus musculus

Alignment Length:	599	Identity:	115/599 - (19%)
Similarity:	191/599 - (31%)	Gaps:	203/599 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    55 GRYLKVTQNIAAGQIVFIEEPLV--------------VGPKW---------YLSDADKEA-SNVP 95
            ||:|..|::|..|:::..|:..|              :..||         |.....|.. :.||
Mouse   244 GRHLVATKDILPGELLVKEDAFVSVLIPGEMPRPHHCLENKWDTRVTSGDLYCHRCLKHTLATVP 308

  Fly    96 CVGCYTPCRLGKHQCRRCRWPV-----CSAG---------CKHESMECSVLS------------- 133
            |..| :..:....:|.:..|.:     ||.|         | |.::..::|:
Mouse   309 CGSC-SYAKYCSQECMQQAWDLYHSTECSLGGLLLTLGVFC-HVALRMTLLARFEDVDRVVRMLC 371

  Fly   134 --LGSGSPTRADARSLNDYF----RGDALLVLKCLLLQRQSP---------TKWSALLEMQSHEE 183
              :||......::::|...|    :|::  ..|..:.:...|         :.::|:..:..|.|
Mouse   372 DEVGSTDTCLPESKNLVKAFDYTSQGES--EEKSKIGEPPIPGCNVNGKYGSNYNAIFSLLPHTE 434

  Fly   184 ERKGTDLYEEAEKRVVTYLQKRFLCR----------------LKQTNPNLLTD------------ 220
            :       ...|.|.:..:....|||                ||...|.|..|
Mouse   435 K-------HSPEHRFICAISVSALCRQLKADSVQAQTLKSPKLKAVTPGLCADLTVWGAAMLRHM 492

  Fly   221 ----CGPEMLHRLCGI-----IETNFMVIELPSGVELSGLFRQACMMEHACQPNCDFQFDNKTQQ 276
                |..:.:..:|..     |.||...|.|.:|:     |....::.|:|:||....|   |..
Mouse   493 LQLQCNAQAITSICHTGSNESIITNSRQIRLATGI-----FPVVSLLNHSCRPNTSVSF---TGT 549

  Fly   277 VA-VRAGCDLRKGDHLRITY--TNILWGTQLRQHHLRLTKHFSCRCSRCLDPTEYGTYISALTCL 338
            || |||...:.||..:...|  .....|...||..|.....|.|||..|
Mouse   550 VATVRAAQRIAKGQEILHCYGPHESRMGVAERQQRLSSQYFFDCRCGAC---------------- 598

  Fly   339 GDVNQTCGGTHLPVDPLDENTQWK---CDTCPMIVDG---------------------AYVAELQ 379
              ..:|......|        :|:   |.||..::.|                     :.:.:||
Mouse   599 --HAETLRAAAAP--------RWEAFCCKTCRALMQGNDVLSCSNESCTNSVSRDQLVSRLQDLQ 653

  Fly   380 SHMTEQVEGLLAGCPSANQVELLLAR--LTHMLHPNHFHTFNLKHTLIQLYGNEAGLELGVLSNT 442
            ..:....:.|..|.|.....:||..|  ....|...|.....::..|.|.:   |.|...:.|..
Mouse   654 QQVCMAQKLLRTGKPEQAIQQLLRCREAAESFLSAEHTVLGEIEDGLAQAH---ATLGNWLKSAA 715

  Fly   443 QLERKLRLCGELYNVCRRLDPYSIKLAIYVTVILIEVAHTLQEQAR-----RAPAEGTSLLGLAQ 502
            .:::.|::      |..|..|.|           :|:.|.|.:.|:     .|..|..|.:..|:
Mouse   716 HVQKSLQV------VETRHGPSS-----------VEIGHELFKLAQVLFNGLAVPEALSAIWKAE 763

  Fly   503 SRLREAHMVLEKEQ 516
             |:...|...|.|:
Mouse   764 -RILLVHCGPESEE 776

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.