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Protein Alignment SmydA-5 and set5
DIOPT Version :9
Sequence 1: | NP_610202.3 |
Gene: | SmydA-5 / 35538 |
FlyBaseID: | FBgn0033061 |
Length: | 553 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_588413.1 |
Gene: | set5 / 2538853 |
PomBaseID: | SPCC1739.05 |
Length: | 319 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 146 |
Identity: | 39/146 - (26%) |
Similarity: | 55/146 - (37%) |
Gaps: | 34/146 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 EERKGTDLYEEAEKRVVTYLQKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIELPSGVE 247
||...|...||.|. ..||...:|:.: || ..|...:|.:.|:...|
pombe 50 EEALSTKTKEEQEA----------FHRLFNAHPDTM---GP-----FLGPFYSNALTIDETKG-- 94
Fly 248 LSGLFRQACMMEHACQPNCDFQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGTQLRQHHLR-- 310
|:|.....|.|.|.||....::.:..||.|.|..|:..|:.:..||.: |.:.|..
pombe 95 --GMFLLGSRMNHDCSPNVKHTWNPRLDQVTVHAVRDIEAGEEILTTYID------LHKSHTERQ 151
Fly 311 --LTKH--FSCRCSRC 322
|.:| |.|.||.|
pombe 152 KILLEHFGFKCYCSVC 167
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmydA-5 | NP_610202.3 |
zf-MYND |
7..43 |
CDD:280009 |
|
SET |
185..295 |
CDD:279228 |
26/109 (24%) |
set5 | NP_588413.1 |
SET |
<1..319 |
CDD:225491 |
39/146 (27%) |
SET |
4..147 |
CDD:214614 |
31/124 (25%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2289 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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