DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-5 and SMYD1

DIOPT Version :9

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:296 Identity:70/296 - (23%)
Similarity:119/296 - (40%) Gaps:62/296 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GRYLKVTQNIAAGQIVFIEEPLVVGPKWYLSDADKEASNVPCVGCYTPCRLGK-HQCRRCRWP-V 117
            ||.||.|:...|..|:|.|       :.|.:.......|..|..|:.  |..| |:|.:|::. .
Human    18 GRGLKATKEFWAADIIFAE-------RAYSAVVFDSLVNFVCHTCFK--RQEKLHRCGQCKFAHY 73

  Fly   118 CSAGCKHESM-----ECSVLSLGSGSPT---RADARSLNDYFRGDALLVLKCLLLQRQSPTKWSA 174
            |...|:.::.     |||.:......|.   |..||.:....|....|...||:          :
Human    74 CDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRVEREGTGLTEGCLV----------S 128

  Fly   175 LLEMQSH-----EEERKGTDLYEEAEKRVVTYLQKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIE 234
            :.::|:|     |||:|  ||..:.:    |:||..         |........:.:..:.|:|.
Human   129 VDDLQNHVEHFGEEEQK--DLRVDVD----TFLQYW---------PPQSQQFSMQYISHIFGVIN 178

  Fly   235 TNFMVIELPSGVEL--SGLFRQACMMEHACQPNCDFQFDN----------KTQ-QVAVRAGCDLR 286
            .|...:....|::.  .|:|....::.|.|.|||...|:|          .|| ::.:||...:.
Human   179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKIS 243

  Fly   287 KGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCSRC 322
            :|:.|.::|.:.|..::.|:..|:...:|.|.|..|
Human   244 EGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHC 279

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:280009
SET 185..295 CDD:279228 26/122 (21%)