DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-5 and SmydA-1

DIOPT Version :10

Sequence 1:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_309979.5 Gene:SmydA-1 / 1271226 VectorBaseID:AGAMI1_002584 Length:534 Species:Anopheles gambiae


Alignment Length:546 Identity:167/546 - (30%)
Similarity:256/546 - (46%) Gaps:67/546 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CPVCGVAASQACTRCKMVRYCDREHQKQHWPQHKRRCRPFSEEQDAELGRYLKVTQNIAAGQIVF 71
            ||||...||:.|:||.||.||..|||:|.|..||..|:||....:.:.||:|..|::|.||:||.
Mosquito    14 CPVCKKEASKRCSRCAMVYYCCVEHQQQDWKVHKTTCQPFKIFSNEQYGRFLVATRDIKAGEIVL 78

  Fly    72 IEEPLVVGPKWYLSDADKEASNVPCVGCYTPCRLGKH-QCRRCRWPVCSAGCK----HESMECSV 131
            .|.|||.||        .:.:...||||.......|: .|.||.||||...|:    |:: ||. 
Mosquito    79 KESPLVHGP--------AQITGPVCVGCLQGLEEKKYLDCERCGWPVCKRSCQDSPSHQA-ECK- 133

  Fly   132 LSLGSGSPTRADARSLNDYF----RGDALLVLKCLLLQRQSPTKWSALLEMQSHEEERKGTDLYE 192
            .::..||..     |:..::    ....|:.::||||....|.:|..||:::||||||:|::.:.
Mosquito   134 FTIARGSKI-----SIQHFYVPHPTYQCLMPVRCLLLAESDPARWETLLKLESHEEERRGSEQWR 193

  Fly   193 EAEKRVVTYLQKRFLCRLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIEL--PSGVELSGLFRQA 255
            ...:.|...:.:.|.|..|.....:|         |:.|||:.|...:.:  ||.|   .::..|
Mosquito   194 NDREGVAKLIPRFFKCENKWDEDEIL---------RVVGIIQVNGHEVPMTEPSSV---AIYNMA 246

  Fly   256 CMMEHACQPNCDFQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCS 320
            .|:||:|:||....|.|: .:|.:.|...:|:||.|.|.||::||.|..|..||:.||.|.|.|.
Mosquito   247 SMLEHSCRPNLAKSFTNR-GEVVMWAPNPIRRGDRLSICYTDVLWTTGNRLEHLQQTKMFRCECE 310

  Fly   321 RCLDPTEYGTYISALTCLG-DVNQTCGGTHLPVDPLDENTQWKCDTCPMIVDGAYVAELQSHMTE 384
            ||.|.|||.||.||:.|.| ..:..|.|..||||......:|:|..|...|.||.|.::......
Mosquito   311 RCSDRTEYETYFSAVRCSGFQKDSKCKGFLLPVDNAQWTGEWQCLRCSKEVSGATVCQILERARM 375

  Fly   385 QVEGLLAGCPSANQVELLLARLTHMLHPNHFHTFNLKHTLIQLYGNEAGLELGVLSNTQLERKLR 449
            .:|.:..  ...:.....:...:..|..||.:..::|.:|.|:.|.:....:..:...:|..|::
Mosquito   376 DLEAMEK--HREDHCNRYMKHYSKWLTANHQYMVDVKISLSQVIGGKNPEAIKKIPYEKLMNKIK 438

  Fly   450 LCGELYNVCRRLDPYSIKLAIYVTVILIEVAHTLQEQARRAPAEGTSLLGLAQSRLREAHMVLEK 514
            :|.:|..:..::.|...: |...|  ..|:...|.|..||:                     .|.
Mosquito   439 ICQDLIALFEKICPAEAR-AFGAT--RFELHAALAELGRRS---------------------TEA 479

  Fly   515 EQESVAGKKLNEKLQMEIFECEKLIL 540
            ...:.|..:|.:.| ....||.:::|
Mosquito   480 NNPAAAAVQLEDSL-YNANECIRMLL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312 20/35 (57%)
SET_SMYD <232..322 CDD:380997 35/91 (38%)
SmydA-1XP_309979.5 None

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